Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 AC012414.1-201ENST00000556676 535 ntBASIC21.36■■□□□ 1.01
CMKLR1Q99788 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 AC022517.1-201ENST00000592429 346 ntBASIC21.36■■□□□ 1.01
CMKLR1Q99788 AL137784.2-201ENST00000607332 1000 ntBASIC21.36■■□□□ 1.01
CMKLR1Q99788 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.36■■□□□ 1.01
CMKLR1Q99788 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CMKLR1Q99788 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CMKLR1Q99788 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CMKLR1Q99788 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CMKLR1Q99788 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CMKLR1Q99788 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CMKLR1Q99788 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CMKLR1Q99788 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.35■■□□□ 1.01
CMKLR1Q99788 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CMKLR1Q99788 KRT18P5-201ENST00000436075 1291 ntBASIC21.35■■□□□ 1.01
CMKLR1Q99788 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.35■■□□□ 1.01
CMKLR1Q99788 AL031602.1-201ENST00000633169 911 ntBASIC21.35■■□□□ 1.01
CMKLR1Q99788 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CMKLR1Q99788 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CMKLR1Q99788 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CMKLR1Q99788 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CMKLR1Q99788 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.34■■□□□ 1.01
CMKLR1Q99788 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CMKLR1Q99788 OR2I1P-207ENST00000453522 948 ntBASIC21.34■■□□□ 1.01
CMKLR1Q99788 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.34■■□□□ 1.01
CMKLR1Q99788 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CMKLR1Q99788 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CMKLR1Q99788 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CMKLR1Q99788 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CMKLR1Q99788 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CMKLR1Q99788 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CMKLR1Q99788 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4L2-201ENST00000561772 1275 ntBASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4L4-201ENST00000566884 1269 ntBASIC21.33■■□□□ 1.01
CMKLR1Q99788 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4L6-201ENST00000626483 1275 ntBASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4L1-201ENST00000627662 1275 ntBASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4L8-201ENST00000629013 1275 ntBASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4L3-201ENST00000630187 1275 ntBASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4L7-201ENST00000630678 1275 ntBASIC21.33■■□□□ 1.01
CMKLR1Q99788 DUX4L5-201ENST00000630834 1275 ntBASIC21.33■■□□□ 1.01
CMKLR1Q99788 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.33■■□□□ 1
CMKLR1Q99788 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CMKLR1Q99788 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CMKLR1Q99788 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CMKLR1Q99788 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CMKLR1Q99788 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.32■■□□□ 1
CMKLR1Q99788 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CMKLR1Q99788 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CMKLR1Q99788 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CMKLR1Q99788 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CMKLR1Q99788 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.32■■□□□ 1
CMKLR1Q99788 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.32■■□□□ 1
CMKLR1Q99788 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.32■■□□□ 1
CMKLR1Q99788 MIR6084-201ENST00000622012 110 ntBASIC21.32■■□□□ 1
CMKLR1Q99788 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.32■■□□□ 1
CMKLR1Q99788 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.32■■□□□ 1
CMKLR1Q99788 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CMKLR1Q99788 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CMKLR1Q99788 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CMKLR1Q99788 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.31■■□□□ 1
CMKLR1Q99788 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.31■■□□□ 1
CMKLR1Q99788 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CMKLR1Q99788 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
CMKLR1Q99788 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.31■■□□□ 1
CMKLR1Q99788 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.31■■□□□ 1
CMKLR1Q99788 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CMKLR1Q99788 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.31■■□□□ 1
CMKLR1Q99788 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.31■■□□□ 1
CMKLR1Q99788 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.31■■□□□ 1
CMKLR1Q99788 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.31■■□□□ 1
CMKLR1Q99788 IKBKGP1-201ENST00000612193 1073 ntBASIC21.31■■□□□ 1
CMKLR1Q99788 RARRES2P11-201ENST00000635158 484 ntBASIC21.31■■□□□ 1
CMKLR1Q99788 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.31■■□□□ 1
CMKLR1Q99788 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CMKLR1Q99788 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.31■■□□□ 1
CMKLR1Q99788 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.3■■□□□ 1
CMKLR1Q99788 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms