Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BBS4Q96RK4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.09■□□□□ 0.97
BBS4Q96RK4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BBS4Q96RK4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.09■□□□□ 0.97
BBS4Q96RK4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BBS4Q96RK4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
BBS4Q96RK4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.08■□□□□ 0.97
BBS4Q96RK4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.08■□□□□ 0.97
BBS4Q96RK4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.08■□□□□ 0.97
BBS4Q96RK4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.08■□□□□ 0.97
BBS4Q96RK4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
BBS4Q96RK4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
BBS4Q96RK4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
BBS4Q96RK4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
BBS4Q96RK4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.07■□□□□ 0.96
BBS4Q96RK4 KRT16P3-201ENST00000439127 1283 ntBASIC21.07■□□□□ 0.96
BBS4Q96RK4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.07■□□□□ 0.96
BBS4Q96RK4 MIR6724-1-201ENST00000616420 92 ntBASIC21.07■□□□□ 0.96
BBS4Q96RK4 MIR6724-2-201ENST00000616483 92 ntBASIC21.07■□□□□ 0.96
BBS4Q96RK4 MIR6724-4-201ENST00000617390 92 ntBASIC21.07■□□□□ 0.96
BBS4Q96RK4 MIR6724-3-201ENST00000622482 92 ntBASIC21.07■□□□□ 0.96
BBS4Q96RK4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
BBS4Q96RK4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BBS4Q96RK4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.07■□□□□ 0.96
BBS4Q96RK4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BBS4Q96RK4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BBS4Q96RK4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
BBS4Q96RK4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.07■□□□□ 0.96
BBS4Q96RK4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.06■□□□□ 0.96
BBS4Q96RK4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
BBS4Q96RK4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.06■□□□□ 0.96
BBS4Q96RK4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BBS4Q96RK4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.06■□□□□ 0.96
BBS4Q96RK4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.06■□□□□ 0.96
BBS4Q96RK4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.06■□□□□ 0.96
BBS4Q96RK4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
BBS4Q96RK4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.06■□□□□ 0.96
BBS4Q96RK4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BBS4Q96RK4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BBS4Q96RK4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BBS4Q96RK4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BBS4Q96RK4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
BBS4Q96RK4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.05■□□□□ 0.96
BBS4Q96RK4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS4Q96RK4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
BBS4Q96RK4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS4Q96RK4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS4Q96RK4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS4Q96RK4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
BBS4Q96RK4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
BBS4Q96RK4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BBS4Q96RK4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS4Q96RK4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
BBS4Q96RK4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
BBS4Q96RK4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
BBS4Q96RK4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS4Q96RK4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS4Q96RK4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
BBS4Q96RK4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BBS4Q96RK4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
BBS4Q96RK4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
BBS4Q96RK4 GUSBP5-201ENST00000418136 578 ntBASIC21.04■□□□□ 0.96
BBS4Q96RK4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BBS4Q96RK4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
BBS4Q96RK4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
BBS4Q96RK4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS4Q96RK4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BBS4Q96RK4 AC009102.2-201ENST00000606772 1639 ntBASIC21.03■□□□□ 0.96
BBS4Q96RK4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BBS4Q96RK4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
BBS4Q96RK4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS4Q96RK4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS4Q96RK4 FP325331.1-202ENST00000623531 1380 ntBASIC21.02■□□□□ 0.96
BBS4Q96RK4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.02■□□□□ 0.96
BBS4Q96RK4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS4Q96RK4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.02■□□□□ 0.96
BBS4Q96RK4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.02■□□□□ 0.96
BBS4Q96RK4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.02■□□□□ 0.96
BBS4Q96RK4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.02■□□□□ 0.96
BBS4Q96RK4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.02■□□□□ 0.96
BBS4Q96RK4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS4Q96RK4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BBS4Q96RK4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.02■□□□□ 0.96
BBS4Q96RK4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS4Q96RK4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.02■□□□□ 0.95
BBS4Q96RK4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
BBS4Q96RK4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
BBS4Q96RK4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
BBS4Q96RK4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BBS4Q96RK4 LINC01529-204ENST00000636474 1715 ntBASIC21.01■□□□□ 0.95
BBS4Q96RK4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.01■□□□□ 0.95
BBS4Q96RK4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.01■□□□□ 0.95
BBS4Q96RK4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
BBS4Q96RK4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.01■□□□□ 0.95
BBS4Q96RK4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.01■□□□□ 0.95
BBS4Q96RK4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.01■□□□□ 0.95
BBS4Q96RK4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
BBS4Q96RK4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
BBS4Q96RK4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BBS4Q96RK4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 399.7 ms