Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GAFA1Q96PS6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.58■□□□□ 0.57
GAFA1Q96PS6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GAFA1Q96PS6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.58■□□□□ 0.57
GAFA1Q96PS6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.58■□□□□ 0.56
GAFA1Q96PS6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.57■□□□□ 0.56
GAFA1Q96PS6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GAFA1Q96PS6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 AC092171.4-201ENST00000609130 632 ntBASIC18.56■□□□□ 0.56
GAFA1Q96PS6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.56■□□□□ 0.56
GAFA1Q96PS6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.55■□□□□ 0.56
GAFA1Q96PS6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
GAFA1Q96PS6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GAFA1Q96PS6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.54■□□□□ 0.56
GAFA1Q96PS6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
GAFA1Q96PS6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GAFA1Q96PS6 pRNA.6-201ENST00000610482 90 ntBASIC18.54■□□□□ 0.56
GAFA1Q96PS6 pRNA.5-201ENST00000612139 90 ntBASIC18.54■□□□□ 0.56
GAFA1Q96PS6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
GAFA1Q96PS6 pRNA.11-201ENST00000618423 90 ntBASIC18.54■□□□□ 0.56
GAFA1Q96PS6 pRNA.13-201ENST00000619112 90 ntBASIC18.54■□□□□ 0.56
GAFA1Q96PS6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
GAFA1Q96PS6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 AL499627.2-201ENST00000606283 725 ntBASIC18.53■□□□□ 0.56
GAFA1Q96PS6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
GAFA1Q96PS6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GAFA1Q96PS6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms