Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 AC009299.2-201ENST00000482477 511 ntBASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 AC239859.2-201ENST00000444165 318 ntBASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 AL121603.2-201ENST00000557373 2117 ntBASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSMEM1Q8N8F7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSMEM1Q8N8F7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LSMEM1Q8N8F7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.39■□□□□ 0.86
LSMEM1Q8N8F7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.39■□□□□ 0.86
LSMEM1Q8N8F7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 FP325331.1-202ENST00000623531 1380 ntBASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 MTDHP2-201ENST00000601468 714 ntBASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 AL451085.2-201ENST00000605085 799 ntBASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSMEM1Q8N8F7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 AC233723.2-201ENST00000623798 2106 ntBASIC20.38■□□□□ 0.85
LSMEM1Q8N8F7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 SLC25A24-204ENST00000569674 2357 ntBASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSMEM1Q8N8F7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 LINC01529-204ENST00000636474 1715 ntBASIC20.36■□□□□ 0.85
LSMEM1Q8N8F7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 AL117328.2-201ENST00000624617 1940 ntBASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 AC010997.5-201ENST00000609182 354 ntBASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSMEM1Q8N8F7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSMEM1Q8N8F7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSMEM1Q8N8F7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms