Protein–RNA interactions for Protein: Q8N1A6

C4orf33, UPF0462 protein C4orf33, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf33Q8N1A6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
C4orf33Q8N1A6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
C4orf33Q8N1A6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
C4orf33Q8N1A6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
C4orf33Q8N1A6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.39■■□□□ 1.18
C4orf33Q8N1A6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
C4orf33Q8N1A6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
C4orf33Q8N1A6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
C4orf33Q8N1A6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.39■■□□□ 1.18
C4orf33Q8N1A6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
C4orf33Q8N1A6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.38■■□□□ 1.17
C4orf33Q8N1A6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
C4orf33Q8N1A6 AL353803.4-201ENST00000565882 1934 ntBASIC22.37■■□□□ 1.17
C4orf33Q8N1A6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.37■■□□□ 1.17
C4orf33Q8N1A6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.37■■□□□ 1.17
C4orf33Q8N1A6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
C4orf33Q8N1A6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
C4orf33Q8N1A6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.37■■□□□ 1.17
C4orf33Q8N1A6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
C4orf33Q8N1A6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 C11orf96-202ENST00000528572 1834 ntBASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 AC092053.2-201ENST00000640557 1818 ntBASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 AC080038.3-201ENST00000623346 1952 ntBASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
C4orf33Q8N1A6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 PKD1P6-201ENST00000343738 4769 ntBASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
C4orf33Q8N1A6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
C4orf33Q8N1A6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 AL024507.2-201ENST00000606070 2574 ntBASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.33■■□□□ 1.17
C4orf33Q8N1A6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.33■■□□□ 1.16
C4orf33Q8N1A6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
C4orf33Q8N1A6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.33■■□□□ 1.16
C4orf33Q8N1A6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
C4orf33Q8N1A6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
C4orf33Q8N1A6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C4orf33Q8N1A6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
C4orf33Q8N1A6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
C4orf33Q8N1A6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
C4orf33Q8N1A6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms