Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC116Q8IYX3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC116Q8IYX3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC116Q8IYX3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC116Q8IYX3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC116Q8IYX3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC116Q8IYX3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC116Q8IYX3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC116Q8IYX3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC116Q8IYX3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC116Q8IYX3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21■□□□□ 0.95
CCDC116Q8IYX3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC116Q8IYX3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21■□□□□ 0.95
CCDC116Q8IYX3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC116Q8IYX3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC116Q8IYX3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC116Q8IYX3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC116Q8IYX3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 FP325331.1-202ENST00000623531 1380 ntBASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 LINC01529-204ENST00000636474 1715 ntBASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC116Q8IYX3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC116Q8IYX3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC116Q8IYX3 AL356441.2-201ENST00000443009 864 ntBASIC20.97■□□□□ 0.95
CCDC116Q8IYX3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC116Q8IYX3 AL356740.2-201ENST00000601559 647 ntBASIC20.97■□□□□ 0.95
CCDC116Q8IYX3 AC012676.1-201ENST00000574705 1949 ntBASIC20.97■□□□□ 0.95
CCDC116Q8IYX3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC116Q8IYX3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC116Q8IYX3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 AL117332.1-201ENST00000622628 974 ntBASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC116Q8IYX3 C1orf229-201ENST00000623686 2258 ntBASIC20.95■□□□□ 0.95
CCDC116Q8IYX3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC116Q8IYX3 C17orf82-201ENST00000623772 1530 ntBASIC20.95■□□□□ 0.94
CCDC116Q8IYX3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC116Q8IYX3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC116Q8IYX3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC116Q8IYX3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC116Q8IYX3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC116Q8IYX3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 MIR3621-201ENST00000580529 85 ntBASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC116Q8IYX3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC116Q8IYX3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC116Q8IYX3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC116Q8IYX3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC116Q8IYX3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC116Q8IYX3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC116Q8IYX3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC116Q8IYX3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms