Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 RASA4CP-201ENST00000424092 1398 ntBASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCN4BQ8IWT1 AC079630.1-202ENST00000618127 1840 ntBASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 AC133637.1-201ENST00000624115 1537 ntBASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCN4BQ8IWT1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 BX842568.3-201ENST00000418104 571 ntBASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 AC233992.3-201ENST00000607491 485 ntBASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
SCN4BQ8IWT1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 AL499627.2-201ENST00000606283 725 ntBASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SCN4BQ8IWT1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.53■■□□□ 1.36
SCN4BQ8IWT1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SCN4BQ8IWT1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 SLC47A1P1-202ENST00000449666 945 ntBASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SCN4BQ8IWT1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 AC126544.1-201ENST00000580842 1059 ntBASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCN4BQ8IWT1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCN4BQ8IWT1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.49■■□□□ 1.35
SCN4BQ8IWT1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms