Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.3■■□□□ 1.48
RTN4RL1Q86UN2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 AC090192.1-201ENST00000517740 490 ntBASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 AL354811.1-201ENST00000610286 706 ntBASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.29■■□□□ 1.48
RTN4RL1Q86UN2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 CCDC92B-201ENST00000575506 885 ntBASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
RTN4RL1Q86UN2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 AL137784.2-201ENST00000607332 1000 ntBASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 AC144652.1-201ENST00000609974 1624 ntBASIC24.27■■□□□ 1.48
RTN4RL1Q86UN2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 LINC01529-204ENST00000636474 1715 ntBASIC24.26■■□□□ 1.47
RTN4RL1Q86UN2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
RTN4RL1Q86UN2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTN4RL1Q86UN2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTN4RL1Q86UN2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.23■■□□□ 1.47
RTN4RL1Q86UN2 AP005435.1-201ENST00000529293 1178 ntBASIC24.23■■□□□ 1.47
RTN4RL1Q86UN2 TERF1P2-201ENST00000583350 1212 ntBASIC24.23■■□□□ 1.47
RTN4RL1Q86UN2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
RTN4RL1Q86UN2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTN4RL1Q86UN2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTN4RL1Q86UN2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTN4RL1Q86UN2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms