Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL353803.4-201ENST00000565882 1934 ntBASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 C11orf96-202ENST00000528572 1834 ntBASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM1Q86UE6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LRRTM1Q86UE6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 AC080038.3-201ENST00000623346 1952 ntBASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 AC129492.7-201ENST00000622992 756 ntBASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM1Q86UE6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRTM1Q86UE6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
LRRTM1Q86UE6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LRRTM1Q86UE6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LRRTM1Q86UE6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
LRRTM1Q86UE6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRTM1Q86UE6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 AC022616.5-201ENST00000518796 181 ntBASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM1Q86UE6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 AC019171.1-201ENST00000601251 1056 ntBASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 AL137060.1-201ENST00000618151 2648 ntBASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM1Q86UE6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 AF131216.4-201ENST00000638924 1588 ntBASIC19.31■□□□□ 0.68
LRRTM1Q86UE6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM1Q86UE6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms