Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.42■■■□□ 2.14
COPS6Q7L5N1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.41■■■□□ 2.14
COPS6Q7L5N1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
COPS6Q7L5N1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
COPS6Q7L5N1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.41■■■□□ 2.14
COPS6Q7L5N1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COPS6Q7L5N1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COPS6Q7L5N1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
COPS6Q7L5N1 AC087623.3-201ENST00000607047 1098 ntBASIC28.41■■■□□ 2.14
COPS6Q7L5N1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.41■■■□□ 2.14
COPS6Q7L5N1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COPS6Q7L5N1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.4■■■□□ 2.14
COPS6Q7L5N1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.4■■■□□ 2.14
COPS6Q7L5N1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COPS6Q7L5N1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COPS6Q7L5N1 TSPY26P-201ENST00000476365 1326 ntBASIC28.4■■■□□ 2.14
COPS6Q7L5N1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
COPS6Q7L5N1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
COPS6Q7L5N1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COPS6Q7L5N1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COPS6Q7L5N1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.39■■■□□ 2.13
COPS6Q7L5N1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
COPS6Q7L5N1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
COPS6Q7L5N1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.38■■■□□ 2.13
COPS6Q7L5N1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.38■■■□□ 2.13
COPS6Q7L5N1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.38■■■□□ 2.13
COPS6Q7L5N1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
COPS6Q7L5N1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
COPS6Q7L5N1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
COPS6Q7L5N1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
COPS6Q7L5N1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
COPS6Q7L5N1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
COPS6Q7L5N1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
COPS6Q7L5N1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
COPS6Q7L5N1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COPS6Q7L5N1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
COPS6Q7L5N1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.35■■■□□ 2.13
COPS6Q7L5N1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.35■■■□□ 2.13
COPS6Q7L5N1 AC079630.1-202ENST00000618127 1840 ntBASIC28.35■■■□□ 2.13
COPS6Q7L5N1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
COPS6Q7L5N1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COPS6Q7L5N1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COPS6Q7L5N1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 OR2I1P-207ENST00000453522 948 ntBASIC28.34■■■□□ 2.13
COPS6Q7L5N1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 AC092666.2-201ENST00000613287 246 ntBASIC28.34■■■□□ 2.13
COPS6Q7L5N1 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.34■■■□□ 2.13
COPS6Q7L5N1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
COPS6Q7L5N1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.33■■■□□ 2.13
COPS6Q7L5N1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
COPS6Q7L5N1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.33■■■□□ 2.13
COPS6Q7L5N1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.12
COPS6Q7L5N1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
COPS6Q7L5N1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
COPS6Q7L5N1 IGHV3-19-201ENST00000521488 291 ntBASIC28.32■■■□□ 2.12
COPS6Q7L5N1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.32■■■□□ 2.12
COPS6Q7L5N1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.32■■■□□ 2.12
COPS6Q7L5N1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COPS6Q7L5N1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COPS6Q7L5N1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
COPS6Q7L5N1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
COPS6Q7L5N1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COPS6Q7L5N1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COPS6Q7L5N1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.3■■■□□ 2.12
COPS6Q7L5N1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.3■■■□□ 2.12
COPS6Q7L5N1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COPS6Q7L5N1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
COPS6Q7L5N1 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.3■■■□□ 2.12
COPS6Q7L5N1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms