Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 NTF6A-201ENST00000591175 560 ntBASIC21.41■■□□□ 1.02
PDCD4Q53EL6 AC074183.2-201ENST00000623112 922 ntBASIC21.41■■□□□ 1.02
PDCD4Q53EL6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 ABHD17AP5-201ENST00000580133 923 ntBASIC21.4■■□□□ 1.02
PDCD4Q53EL6 BHLHE23-202ENST00000612929 1109 ntBASIC21.4■■□□□ 1.02
PDCD4Q53EL6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD4Q53EL6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.39■■□□□ 1.02
PDCD4Q53EL6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDCD4Q53EL6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
PDCD4Q53EL6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDCD4Q53EL6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDCD4Q53EL6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.39■■□□□ 1.02
PDCD4Q53EL6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.39■■□□□ 1.02
PDCD4Q53EL6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
PDCD4Q53EL6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 PVT1_1.1-201ENST00000615125 194 ntBASIC21.39■■□□□ 1.01
PDCD4Q53EL6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDCD4Q53EL6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.38■■□□□ 1.01
PDCD4Q53EL6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.37■■□□□ 1.01
PDCD4Q53EL6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
PDCD4Q53EL6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD4Q53EL6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.35■■□□□ 1.01
PDCD4Q53EL6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.35■■□□□ 1.01
PDCD4Q53EL6 AC139530.1-201ENST00000575312 1977 ntBASIC21.35■■□□□ 1.01
PDCD4Q53EL6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD4Q53EL6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD4Q53EL6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.35■■□□□ 1.01
PDCD4Q53EL6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD4Q53EL6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.34■■□□□ 1.01
PDCD4Q53EL6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.34■■□□□ 1.01
PDCD4Q53EL6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms