Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YLR462WYLR462W 609 nt5.88□□□□□ -1.47
UBP3Q01477 INP1YMR204C 1263 nt5.88□□□□□ -1.47 RIP-Chip
UBP3Q01477 AIM39YOL053W 1188 nt5.88□□□□□ -1.47
UBP3Q01477 PIN2YOR104W 849 nt5.88□□□□□ -1.47
UBP3Q01477 YPR202WYPR202W 717 nt5.88□□□□□ -1.47
UBP3Q01477 YCR097W-AYCR097W-A 267 nt5.87□□□□□ -1.47
UBP3Q01477 DET1YDR051C 1005 nt5.87□□□□□ -1.47
UBP3Q01477 MNN10YDR245W 1182 nt5.87□□□□□ -1.47 RIP-Chip
UBP3Q01477 MHR1YDR296W 681 nt5.87□□□□□ -1.47
UBP3Q01477 SDT1YGL224C 843 nt5.87□□□□□ -1.47 RIP-Chip
UBP3Q01477 SFC1YJR095W 969 nt5.87□□□□□ -1.47
UBP3Q01477 NSE1YLR007W 1011 nt5.87□□□□□ -1.47
UBP3Q01477 EAF7YNL136W 1278 nt5.87□□□□□ -1.47
UBP3Q01477 YNR061CYNR061C 660 nt5.87□□□□□ -1.47
UBP3Q01477 TPT1YOL102C 693 nt5.87□□□□□ -1.47
UBP3Q01477 MED7YOL135C 669 nt5.87□□□□□ -1.47
UBP3Q01477 IAH1YOR126C 717 nt5.87□□□□□ -1.47
UBP3Q01477 COX11YPL132W 903 nt5.87□□□□□ -1.47
UBP3Q01477 YBR063CYBR063C 1215 nt5.87□□□□□ -1.47
UBP3Q01477 NPL4YBR170C 1743 nt5.86□□□□□ -1.47
UBP3Q01477 STB3YDR169C 1542 nt5.86□□□□□ -1.47 RIP-Chip
UBP3Q01477 ADY2YCR010C 852 nt5.86□□□□□ -1.47
UBP3Q01477 DON1YDR273W 1098 nt5.86□□□□□ -1.47
UBP3Q01477 IRC22YEL001C 678 nt5.86□□□□□ -1.47
UBP3Q01477 FRA2YGL220W 363 nt5.86□□□□□ -1.47
UBP3Q01477 YKR070WYKR070W 1059 nt5.86□□□□□ -1.47
UBP3Q01477 CDC73YLR418C 1182 nt5.86□□□□□ -1.47
UBP3Q01477 FDH1YOR388C 1131 nt5.86□□□□□ -1.47
UBP3Q01477 snR37snR37 386 nt5.86□□□□□ -1.47
UBP3Q01477 RET1YOR207C 3450 nt5.86□□□□□ -1.47
UBP3Q01477 YAP1801YHR161C 1914 nt5.86□□□□□ -1.47 RIP-Chip
UBP3Q01477 SIP2YGL208W 1248 nt5.85□□□□□ -1.47
UBP3Q01477 PEX21YGR239C 867 nt5.85□□□□□ -1.47 RIP-Chip
UBP3Q01477 YGR270C-AYGR270C-A 219 nt5.85□□□□□ -1.47
UBP3Q01477 RFA3YJL173C 369 nt5.85□□□□□ -1.47
UBP3Q01477 YKL123WYKL123W 381 nt5.85□□□□□ -1.47
UBP3Q01477 RCN1YKL159C 636 nt5.85□□□□□ -1.47
UBP3Q01477 UPS2YLR168C 693 nt5.85□□□□□ -1.47 RIP-Chip
UBP3Q01477 NBP1YLR457C 960 nt5.85□□□□□ -1.47
UBP3Q01477 YMR082CYMR082C 357 nt5.85□□□□□ -1.47
UBP3Q01477 YOL097W-AYOL097W-A 186 nt5.85□□□□□ -1.47
UBP3Q01477 YBR053CYBR053C 1077 nt5.85□□□□□ -1.47 RIP-Chip
UBP3Q01477 AFT1YGL071W 2073 nt5.85□□□□□ -1.47
UBP3Q01477 HRP1YOL123W 1605 nt5.85□□□□□ -1.47
UBP3Q01477 EUG1YDR518W 1554 nt5.84□□□□□ -1.47
UBP3Q01477 FUM1YPL262W 1467 nt5.84□□□□□ -1.47 RIP-Chip
UBP3Q01477 TEF1YPR080W 1377 nt5.84□□□□□ -1.47
UBP3Q01477 TEF2YBR118W 1377 nt5.84□□□□□ -1.47
UBP3Q01477 APL6YGR261C 2430 nt5.84□□□□□ -1.47 RIP-Chip
UBP3Q01477 ATP16YDL004W 483 nt5.84□□□□□ -1.47
UBP3Q01477 PHO86YJL117W 936 nt5.84□□□□□ -1.47
UBP3Q01477 YLL037WYLL037W 381 nt5.84□□□□□ -1.47
UBP3Q01477 PER33YLR064W 822 nt5.84□□□□□ -1.47
UBP3Q01477 HMX1YLR205C 954 nt5.84□□□□□ -1.47
UBP3Q01477 YLR456WYLR456W 615 nt5.84□□□□□ -1.47
UBP3Q01477 DAL82YNL314W 768 nt5.84□□□□□ -1.47
UBP3Q01477 YPL114WYPL114W 420 nt5.84□□□□□ -1.47
UBP3Q01477 MDM38YOL027C 1722 nt5.84□□□□□ -1.47
UBP3Q01477 YHR045WYHR045W 1683 nt5.84□□□□□ -1.47 RIP-Chip
UBP3Q01477 SLI1YGR212W 1407 nt5.83□□□□□ -1.48 RIP-Chip
UBP3Q01477 SEC12YNR026C 1416 nt5.83□□□□□ -1.48
UBP3Q01477 KRS1YDR037W 1776 nt5.83□□□□□ -1.48 RIP-Chip
UBP3Q01477 NOB1YOR056C 1380 nt5.83□□□□□ -1.48
UBP3Q01477 RFT1YBL020W 1725 nt5.83□□□□□ -1.48 RIP-Chip
UBP3Q01477 YDL012CYDL012C 324 nt5.83□□□□□ -1.48
UBP3Q01477 QRI7YDL104C 1224 nt5.83□□□□□ -1.48 RIP-Chip
UBP3Q01477 SPR28YDR218C 1272 nt5.83□□□□□ -1.48
UBP3Q01477 YJL193WYJL193W 1209 nt5.83□□□□□ -1.48
UBP3Q01477 YLR163W-AYLR163W-A 114 nt5.83□□□□□ -1.48
UBP3Q01477 YLR346CYLR346C 306 nt5.83□□□□□ -1.48
UBP3Q01477 GAB1YLR459W 1185 nt5.83□□□□□ -1.48
UBP3Q01477 ERD2YBL040C 660 nt5.83□□□□□ -1.48
UBP3Q01477 YBL044WYBL044W 369 nt5.83□□□□□ -1.48
UBP3Q01477 RHO2YNL090W 579 nt5.83□□□□□ -1.48
UBP3Q01477 YBL094CYBL094C 333 nt5.83□□□□□ -1.48
UBP3Q01477 YOR032W-AYOR032W-A 201 nt5.83□□□□□ -1.48
UBP3Q01477 SME1YOR159C 285 nt5.83□□□□□ -1.48
UBP3Q01477 GSY2YLR258W 2118 nt5.83□□□□□ -1.48
UBP3Q01477 GIR2YDR152W 798 nt5.82□□□□□ -1.48 RIP-Chip
UBP3Q01477 PRE1YER012W 597 nt5.82□□□□□ -1.48 RIP-Chip
UBP3Q01477 VMA16YHR026W 642 nt5.82□□□□□ -1.48
UBP3Q01477 AIM18YHR198C 966 nt5.82□□□□□ -1.48
UBP3Q01477 YIL163CYIL163C 354 nt5.82□□□□□ -1.48
UBP3Q01477 ARG1YOL058W 1263 nt5.82□□□□□ -1.48
UBP3Q01477 SAS5YOR213C 747 nt5.82□□□□□ -1.48
UBP3Q01477 YPR098CYPR098C 486 nt5.82□□□□□ -1.48 RIP-Chip
UBP3Q01477 UBC4YBR082C 447 nt5.82□□□□□ -1.48 RIP-Chip
UBP3Q01477 TSL1YML100W 3297 nt5.82□□□□□ -1.48
UBP3Q01477 DED81YHR019C 1665 nt5.82□□□□□ -1.48
UBP3Q01477 RHB1YCR027C 630 nt5.81□□□□□ -1.48
UBP3Q01477 YDL186WYDL186W 834 nt5.81□□□□□ -1.48
UBP3Q01477 YLR042CYLR042C 486 nt5.81□□□□□ -1.48 RIP-Chip
UBP3Q01477 TFS1YLR178C 660 nt5.81□□□□□ -1.48
UBP3Q01477 YPT6YLR262C 648 nt5.81□□□□□ -1.48
UBP3Q01477 POP8YBL018C 402 nt5.81□□□□□ -1.48
UBP3Q01477 CPR3YML078W 549 nt5.81□□□□□ -1.48
UBP3Q01477 PML39YML107C 1005 nt5.81□□□□□ -1.48 RIP-Chip
UBP3Q01477 MRP2YPR166C 348 nt5.81□□□□□ -1.48
UBP3Q01477 SHE3YBR130C 1278 nt5.81□□□□□ -1.48
UBP3Q01477 snR32snR32 188 nt5.81□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 49 ms