Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 UBP7YIL156W 3216 nt6.27□□□□□ -1.41
UFD2P54860 IWR1YDL115C 1062 nt6.27□□□□□ -1.41
UFD2P54860 RSM10YDR041W 612 nt6.27□□□□□ -1.41
UFD2P54860 YLR317WYLR317W 435 nt6.27□□□□□ -1.41
UFD2P54860 GPI12YMR281W 915 nt6.27□□□□□ -1.41
UFD2P54860 PTK2YJR059W 2457 nt6.27□□□□□ -1.41
UFD2P54860 YJR061WYJR061W 2808 nt6.27□□□□□ -1.41
UFD2P54860 FHL1YPR104C 2811 nt6.26□□□□□ -1.41
UFD2P54860 KTR6YPL053C 1341 nt6.26□□□□□ -1.41
UFD2P54860 AMA1YGR225W 1782 nt6.26□□□□□ -1.41
UFD2P54860 CTF13YMR094W 1437 nt6.26□□□□□ -1.41
UFD2P54860 SRB7YDR308C 423 nt6.26□□□□□ -1.41
UFD2P54860 YKL202WYKL202W 582 nt6.26□□□□□ -1.41
UFD2P54860 YLR462WYLR462W 609 nt6.26□□□□□ -1.41
UFD2P54860 PRE7YBL041W 726 nt6.26□□□□□ -1.41
UFD2P54860 UBC4YBR082C 447 nt6.26□□□□□ -1.41
UFD2P54860 YPR202WYPR202W 717 nt6.26□□□□□ -1.41
UFD2P54860 MGA1YGR249W 1371 nt6.26□□□□□ -1.41
UFD2P54860 NGR1YBR212W 2019 nt6.26□□□□□ -1.41
UFD2P54860 KEX2YNL238W 2445 nt6.26□□□□□ -1.41
UFD2P54860 HSF1YGL073W 2502 nt6.26□□□□□ -1.41
UFD2P54860 BAP2YBR068C 1830 nt6.25□□□□□ -1.41
UFD2P54860 SSK1YLR006C 2139 nt6.25□□□□□ -1.41
UFD2P54860 RDI1YDL135C 609 nt6.25□□□□□ -1.41
UFD2P54860 COQ4YDR204W 1008 nt6.25□□□□□ -1.41
UFD2P54860 YFL064CYFL064C 525 nt6.25□□□□□ -1.41
UFD2P54860 YGR079WYGR079W 1113 nt6.25□□□□□ -1.41
UFD2P54860 MRPL49YJL096W 486 nt6.25□□□□□ -1.41
UFD2P54860 YKL151CYKL151C 1014 nt6.25□□□□□ -1.41
UFD2P54860 TEM1YML064C 738 nt6.25□□□□□ -1.41
UFD2P54860 COG5YNL051W 1212 nt6.25□□□□□ -1.41
UFD2P54860 YNG1YOR064C 660 nt6.25□□□□□ -1.41
UFD2P54860 CBC2YPL178W 627 nt6.25□□□□□ -1.41
UFD2P54860 YPR195CYPR195C 330 nt6.25□□□□□ -1.41
UFD2P54860 snR37snR37 386 nt6.25□□□□□ -1.41
UFD2P54860 MET3YJR010W 1536 nt6.25□□□□□ -1.41
UFD2P54860 ASA1YPR085C 1332 nt6.25□□□□□ -1.41
UFD2P54860 YHR045WYHR045W 1683 nt6.24□□□□□ -1.41
UFD2P54860 GEP3YOR205C 1671 nt6.24□□□□□ -1.41
UFD2P54860 SPT14YPL175W 1359 nt6.24□□□□□ -1.41
UFD2P54860 RPT6YGL048C 1218 nt6.24□□□□□ -1.41
UFD2P54860 TYS1YGR185C 1185 nt6.24□□□□□ -1.41
UFD2P54860 COX6YHR051W 447 nt6.24□□□□□ -1.41
UFD2P54860 YPT6YLR262C 648 nt6.24□□□□□ -1.41
UFD2P54860 CYC2YOR037W 1101 nt6.24□□□□□ -1.41
UFD2P54860 RAS1YOR101W 930 nt6.24□□□□□ -1.41
UFD2P54860 GCR2YNL199C 1605 nt6.24□□□□□ -1.41
UFD2P54860 ADE13YLR359W 1449 nt6.24□□□□□ -1.41
UFD2P54860 RPT2YDL007W 1314 nt6.24□□□□□ -1.41
UFD2P54860 PCL8YPL219W 1479 nt6.23□□□□□ -1.41
UFD2P54860 ENT2YLR206W 1842 nt6.23□□□□□ -1.41
UFD2P54860 HTB1YDR224C 396 nt6.23□□□□□ -1.41
UFD2P54860 SLO1YER180C-A 258 nt6.23□□□□□ -1.41
UFD2P54860 YGL194C-AYGL194C-A 243 nt6.23□□□□□ -1.41
UFD2P54860 YGR182CYGR182C 354 nt6.23□□□□□ -1.41
UFD2P54860 CAB2YIL083C 1098 nt6.23□□□□□ -1.41
UFD2P54860 COX17YLL009C 210 nt6.23□□□□□ -1.41
UFD2P54860 SNF8YPL002C 702 nt6.23□□□□□ -1.41
UFD2P54860 YFL040WYFL040W 1623 nt6.23□□□□□ -1.41
UFD2P54860 PIF1YML061C 2580 nt6.23□□□□□ -1.41
UFD2P54860 IMA2YOL157C 1770 nt6.23□□□□□ -1.41
UFD2P54860 ALD6YPL061W 1503 nt6.22□□□□□ -1.41
UFD2P54860 PRO3YER023W 861 nt6.22□□□□□ -1.41
UFD2P54860 SPT15YER148W 723 nt6.22□□□□□ -1.41
UFD2P54860 YHR127WYHR127W 732 nt6.22□□□□□ -1.41
UFD2P54860 CPR7YJR032W 1182 nt6.22□□□□□ -1.41
UFD2P54860 HMX1YLR205C 954 nt6.22□□□□□ -1.41
UFD2P54860 CPR3YML078W 549 nt6.22□□□□□ -1.41
UFD2P54860 NAT3YPR131C 588 nt6.22□□□□□ -1.41
UFD2P54860 DED81YHR019C 1665 nt6.22□□□□□ -1.41
UFD2P54860 ERT1YBR239C 1590 nt6.22□□□□□ -1.41
UFD2P54860 PST1YDR055W 1335 nt6.22□□□□□ -1.41
UFD2P54860 MMP1YLL061W 1752 nt6.21□□□□□ -1.41
UFD2P54860 YHR177WYHR177W 1362 nt6.21□□□□□ -1.41
UFD2P54860 CLA4YNL298W 2529 nt6.21□□□□□ -1.42
UFD2P54860 TAX4YJL083W 1815 nt6.21□□□□□ -1.42
UFD2P54860 NRG1YDR043C 696 nt6.21□□□□□ -1.42
UFD2P54860 RPL12AYEL054C 498 nt6.21□□□□□ -1.42
UFD2P54860 HSP150YJL159W 1242 nt6.21□□□□□ -1.42
UFD2P54860 YOR318CYOR318C 306 nt6.21□□□□□ -1.42
UFD2P54860 PHO8YDR481C 1701 nt6.2□□□□□ -1.42
UFD2P54860 MEI4YER044C-A 1227 nt6.2□□□□□ -1.42
UFD2P54860 YGL117WYGL117W 798 nt6.2□□□□□ -1.42
UFD2P54860 CKA1YIL035C 1119 nt6.2□□□□□ -1.42
UFD2P54860 SFH1YLR321C 1281 nt6.2□□□□□ -1.42
UFD2P54860 PFA3YNL326C 1011 nt6.2□□□□□ -1.42
UFD2P54860 YOR283WYOR283W 693 nt6.2□□□□□ -1.42
UFD2P54860 SHE3YBR130C 1278 nt6.2□□□□□ -1.42
UFD2P54860 TMN2YDR107C 2019 nt6.2□□□□□ -1.42
UFD2P54860 GPT2YKR067W 2232 nt6.19□□□□□ -1.42
UFD2P54860 MDM38YOL027C 1722 nt6.19□□□□□ -1.42
UFD2P54860 AIR2YDL175C 1035 nt6.19□□□□□ -1.42
UFD2P54860 COBQ0105 1158 nt6.19□□□□□ -1.42
UFD2P54860 TDH3YGR192C 999 nt6.19□□□□□ -1.42
UFD2P54860 GON7YJL184W 372 nt6.19□□□□□ -1.42
UFD2P54860 PRP21YJL203W 843 nt6.19□□□□□ -1.42
UFD2P54860 SFC1YJR095W 969 nt6.19□□□□□ -1.42
UFD2P54860 RUF22RUF22 515 nt6.19□□□□□ -1.42
UFD2P54860 SPS18YNL204C 903 nt6.19□□□□□ -1.42
UFD2P54860 snR11snR11 258 nt6.19□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms