Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YLR159WYLR159W 345 nt5.5□□□□□ -1.53
HDA1P53973 YLR161WYLR161W 345 nt5.5□□□□□ -1.53
HDA1P53973 SPC2YML055W 537 nt5.5□□□□□ -1.53
HDA1P53973 SLZ1YNL196C 897 nt5.5□□□□□ -1.53
HDA1P53973 ENV9YOR246C 993 nt5.5□□□□□ -1.53
HDA1P53973 snR3snR3 194 nt5.5□□□□□ -1.53
HDA1P53973 NSI1YDR026C 1713 nt5.5□□□□□ -1.53
HDA1P53973 ROT2YBR229C 2865 nt5.5□□□□□ -1.53
HDA1P53973 YMR102CYMR102C 2505 nt5.5□□□□□ -1.53
HDA1P53973 UGA1YGR019W 1416 nt5.49□□□□□ -1.53
HDA1P53973 IFM1YOL023W 2031 nt5.49□□□□□ -1.53
HDA1P53973 AIR2YDL175C 1035 nt5.49□□□□□ -1.53
HDA1P53973 YDR417CYDR417C 372 nt5.49□□□□□ -1.53
HDA1P53973 SNL1YIL016W 480 nt5.49□□□□□ -1.53
HDA1P53973 CMC1YKL137W 336 nt5.49□□□□□ -1.53
HDA1P53973 APS1YLR170C 471 nt5.49□□□□□ -1.53
HDA1P53973 YMR084WYMR084W 789 nt5.49□□□□□ -1.53
HDA1P53973 YPL199CYPL199C 723 nt5.49□□□□□ -1.53
HDA1P53973 RNR3YIL066C 2610 nt5.49□□□□□ -1.53
HDA1P53973 ALG9YNL219C 1668 nt5.49□□□□□ -1.53
HDA1P53973 ELP2YGR200C 2367 nt5.49□□□□□ -1.53
HDA1P53973 HES1YOR237W 1305 nt5.48□□□□□ -1.53
HDA1P53973 APE1YKL103C 1545 nt5.48□□□□□ -1.53
HDA1P53973 TCM62YBR044C 1719 nt5.48□□□□□ -1.53
HDA1P53973 THI22YPR121W 1719 nt5.48□□□□□ -1.53
HDA1P53973 EIS1YMR031C 2532 nt5.48□□□□□ -1.53
HDA1P53973 MSS2YDL107W 1056 nt5.48□□□□□ -1.53
HDA1P53973 DCV1YFR012W 609 nt5.48□□□□□ -1.53
HDA1P53973 GTT1YIR038C 705 nt5.48□□□□□ -1.53
HDA1P53973 YJR012CYJR012C 624 nt5.48□□□□□ -1.53
HDA1P53973 YKL091CYKL091C 933 nt5.48□□□□□ -1.53
HDA1P53973 YLR271WYLR271W 825 nt5.48□□□□□ -1.53
HDA1P53973 NMA1YLR328W 1206 nt5.48□□□□□ -1.53
HDA1P53973 CDC73YLR418C 1182 nt5.48□□□□□ -1.53
HDA1P53973 YBR013CYBR013C 390 nt5.48□□□□□ -1.53
HDA1P53973 MCT1YOR221C 1083 nt5.48□□□□□ -1.53
HDA1P53973 SRL4YPL033C 846 nt5.48□□□□□ -1.53
HDA1P53973 GRX5YPL059W 453 nt5.48□□□□□ -1.53
HDA1P53973 YPR142CYPR142C 564 nt5.48□□□□□ -1.53
HDA1P53973 VPS1YKR001C 2115 nt5.48□□□□□ -1.53
HDA1P53973 CBP1YJL209W 1965 nt5.47□□□□□ -1.53
HDA1P53973 HSP104YLL026W 2727 nt5.47□□□□□ -1.53
HDA1P53973 UBX2YML013W 1755 nt5.47□□□□□ -1.53
HDA1P53973 YGL230CYGL230C 444 nt5.47□□□□□ -1.53
HDA1P53973 TRX2YGR209C 315 nt5.47□□□□□ -1.53
HDA1P53973 PER33YLR064W 822 nt5.47□□□□□ -1.53
HDA1P53973 YMR030W-AYMR030W-A 291 nt5.47□□□□□ -1.53
HDA1P53973 YNL162W-AYNL162W-A 219 nt5.47□□□□□ -1.53
HDA1P53973 CTS2YDR371W 1536 nt5.47□□□□□ -1.53
HDA1P53973 HOS1YPR068C 1413 nt5.47□□□□□ -1.53
HDA1P53973 SRO9YCL037C 1305 nt5.47□□□□□ -1.53
HDA1P53973 VAN1YML115C 1608 nt5.46□□□□□ -1.54
HDA1P53973 DBP8YHR169W 1296 nt5.46□□□□□ -1.54
HDA1P53973 PAU17YLL025W 375 nt5.46□□□□□ -1.54
HDA1P53973 YAR019W-AYAR019W-A 333 nt5.46□□□□□ -1.54
HDA1P53973 GAB1YLR459W 1185 nt5.46□□□□□ -1.54
HDA1P53973 MRPL39YML009C 213 nt5.46□□□□□ -1.54
HDA1P53973 PDR16YNL231C 1056 nt5.46□□□□□ -1.54
HDA1P53973 TRM10YOL093W 882 nt5.46□□□□□ -1.54
HDA1P53973 MUM2YBR057C 1101 nt5.46□□□□□ -1.54
HDA1P53973 YCL001W-AYCL001W-A 462 nt5.46□□□□□ -1.54
HDA1P53973 CLA4YNL298W 2529 nt5.46□□□□□ -1.54
HDA1P53973 DBP5YOR046C 1449 nt5.46□□□□□ -1.54
HDA1P53973 RPN6YDL097C 1305 nt5.46□□□□□ -1.54
HDA1P53973 OXP1YKL215C 3861 nt5.46□□□□□ -1.54
HDA1P53973 LDB17YDL146W 1476 nt5.45□□□□□ -1.54
HDA1P53973 YLR108CYLR108C 1458 nt5.45□□□□□ -1.54
HDA1P53973 SHE9YDR393W 1371 nt5.45□□□□□ -1.54
HDA1P53973 NTH2YBR001C 2343 nt5.45□□□□□ -1.54
HDA1P53973 YDL027CYDL027C 1263 nt5.45□□□□□ -1.54
HDA1P53973 YER187WYER187W 426 nt5.45□□□□□ -1.54
HDA1P53973 YGL188CYGL188C 174 nt5.45□□□□□ -1.54
HDA1P53973 LST7YGR057C 729 nt5.45□□□□□ -1.54
HDA1P53973 YGR153WYGR153W 654 nt5.45□□□□□ -1.54
HDA1P53973 YJL032WYJL032W 315 nt5.45□□□□□ -1.54
HDA1P53973 YNL171CYNL171C 369 nt5.45□□□□□ -1.54
HDA1P53973 MDJ2YNL328C 441 nt5.45□□□□□ -1.54
HDA1P53973 YBL094CYBL094C 333 nt5.45□□□□□ -1.54
HDA1P53973 POC4YPL144W 447 nt5.45□□□□□ -1.54
HDA1P53973 QCR2YPR191W 1107 nt5.45□□□□□ -1.54
HDA1P53973 YFR052C-AYFR052C-A 306 nt5.44□□□□□ -1.54
HDA1P53973 PEF1YGR058W 1008 nt5.44□□□□□ -1.54
HDA1P53973 YJL156W-AYJL156W-A 222 nt5.44□□□□□ -1.54
HDA1P53973 TTI2YJR136C 1266 nt5.44□□□□□ -1.54
HDA1P53973 IRC25YLR021W 540 nt5.44□□□□□ -1.54
HDA1P53973 YLR202CYLR202C 327 nt5.44□□□□□ -1.54
HDA1P53973 YNR025CYNR025C 360 nt5.44□□□□□ -1.54
HDA1P53973 MVD1YNR043W 1191 nt5.44□□□□□ -1.54
HDA1P53973 TGS1YPL157W 948 nt5.44□□□□□ -1.54
HDA1P53973 YPR071WYPR071W 636 nt5.44□□□□□ -1.54
HDA1P53973 GRS1YBR121C 2004 nt5.44□□□□□ -1.54
HDA1P53973 GAS5YOL030W 1455 nt5.44□□□□□ -1.54
HDA1P53973 UBP7YIL156W 3216 nt5.44□□□□□ -1.54
HDA1P53973 PDR10YOR328W 4695 nt5.44□□□□□ -1.54
HDA1P53973 YHR177WYHR177W 1362 nt5.43□□□□□ -1.54
HDA1P53973 SSU1YPL092W 1377 nt5.43□□□□□ -1.54
HDA1P53973 SED4YCR067C 3198 nt5.43□□□□□ -1.54
HDA1P53973 TDA6YPR157W 1404 nt5.43□□□□□ -1.54
HDA1P53973 PSF2YJL072C 642 nt5.43□□□□□ -1.54
HDA1P53973 YLR163W-AYLR163W-A 114 nt5.43□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 23.5 ms