Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CLCN4P51793 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.66■■□□□ 1.38
CLCN4P51793 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.66■■□□□ 1.38
CLCN4P51793 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLCN4P51793 OR2I1P-207ENST00000453522 948 ntBASIC23.66■■□□□ 1.38
CLCN4P51793 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.66■■□□□ 1.38
CLCN4P51793 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLCN4P51793 CCDC92B-201ENST00000575506 885 ntBASIC23.66■■□□□ 1.38
CLCN4P51793 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.66■■□□□ 1.38
CLCN4P51793 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.66■■□□□ 1.38
CLCN4P51793 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CLCN4P51793 AP003733.4-201ENST00000623785 1697 ntBASIC23.66■■□□□ 1.38
CLCN4P51793 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLCN4P51793 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLCN4P51793 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLCN4P51793 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CLCN4P51793 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLCN4P51793 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLCN4P51793 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.65■■□□□ 1.38
CLCN4P51793 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.65■■□□□ 1.38
CLCN4P51793 FP325331.1-202ENST00000623531 1380 ntBASIC23.65■■□□□ 1.38
CLCN4P51793 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.64■■□□□ 1.38
CLCN4P51793 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLCN4P51793 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.64■■□□□ 1.38
CLCN4P51793 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.64■■□□□ 1.37
CLCN4P51793 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CLCN4P51793 DUX4L4-201ENST00000566884 1269 ntBASIC23.64■■□□□ 1.37
CLCN4P51793 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.64■■□□□ 1.37
CLCN4P51793 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLCN4P51793 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CLCN4P51793 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLCN4P51793 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CLCN4P51793 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN4P51793 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN4P51793 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN4P51793 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN4P51793 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN4P51793 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN4P51793 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.63■■□□□ 1.37
CLCN4P51793 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCN4P51793 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN4P51793 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN4P51793 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN4P51793 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.62■■□□□ 1.37
CLCN4P51793 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.62■■□□□ 1.37
CLCN4P51793 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.62■■□□□ 1.37
CLCN4P51793 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.62■■□□□ 1.37
CLCN4P51793 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN4P51793 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN4P51793 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN4P51793 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCN4P51793 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CLCN4P51793 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN4P51793 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN4P51793 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN4P51793 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CLCN4P51793 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.61■■□□□ 1.37
CLCN4P51793 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.61■■□□□ 1.37
CLCN4P51793 AC004911.1-201ENST00000416316 871 ntBASIC23.61■■□□□ 1.37
CLCN4P51793 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.61■■□□□ 1.37
CLCN4P51793 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
CLCN4P51793 TERF1P2-201ENST00000583350 1212 ntBASIC23.61■■□□□ 1.37
CLCN4P51793 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.61■■□□□ 1.37
CLCN4P51793 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCN4P51793 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN4P51793 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.6■■□□□ 1.37
CLCN4P51793 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN4P51793 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN4P51793 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN4P51793 KRT18P14-201ENST00000534205 1250 ntBASIC23.6■■□□□ 1.37
CLCN4P51793 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CLCN4P51793 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLCN4P51793 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN4P51793 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.59■■□□□ 1.37
CLCN4P51793 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.59■■□□□ 1.37
CLCN4P51793 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.59■■□□□ 1.37
CLCN4P51793 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN4P51793 NTF6G-201ENST00000591094 616 ntBASIC23.59■■□□□ 1.37
CLCN4P51793 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
CLCN4P51793 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN4P51793 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN4P51793 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN4P51793 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.59■■□□□ 1.37
CLCN4P51793 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLCN4P51793 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.59■■□□□ 1.37
CLCN4P51793 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CLCN4P51793 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.58■■□□□ 1.37
CLCN4P51793 AC142381.3-201ENST00000568208 1670 ntBASIC23.58■■□□□ 1.37
CLCN4P51793 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CLCN4P51793 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN4P51793 LINC02228-203ENST00000641970 1355 ntBASIC23.58■■□□□ 1.37
CLCN4P51793 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN4P51793 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.58■■□□□ 1.37
CLCN4P51793 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CLCN4P51793 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CLCN4P51793 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.58■■□□□ 1.37
CLCN4P51793 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN4P51793 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CLCN4P51793 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.58■■□□□ 1.37
CLCN4P51793 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms