Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA3P34903 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
GABRA3P34903 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA3P34903 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA3P34903 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GABRA3P34903 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.73■□□□□ 0.91
GABRA3P34903 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
GABRA3P34903 LINC01529-204ENST00000636474 1715 ntBASIC20.73■□□□□ 0.91
GABRA3P34903 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.72■□□□□ 0.91
GABRA3P34903 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GABRA3P34903 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
GABRA3P34903 MIR3621-201ENST00000580529 85 ntBASIC20.72■□□□□ 0.91
GABRA3P34903 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GABRA3P34903 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GABRA3P34903 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.72■□□□□ 0.91
GABRA3P34903 AC133561.1-201ENST00000568600 2415 ntBASIC20.72■□□□□ 0.91
GABRA3P34903 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.72■□□□□ 0.91
GABRA3P34903 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
GABRA3P34903 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA3P34903 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA3P34903 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.71■□□□□ 0.91
GABRA3P34903 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA3P34903 C17orf82-201ENST00000623772 1530 ntBASIC20.71■□□□□ 0.91
GABRA3P34903 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.71■□□□□ 0.91
GABRA3P34903 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA3P34903 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
GABRA3P34903 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
GABRA3P34903 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA3P34903 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
GABRA3P34903 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA3P34903 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.7■□□□□ 0.9
GABRA3P34903 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA3P34903 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA3P34903 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
GABRA3P34903 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA3P34903 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA3P34903 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA3P34903 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA3P34903 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.7■□□□□ 0.9
GABRA3P34903 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GABRA3P34903 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA3P34903 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GABRA3P34903 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA3P34903 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA3P34903 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA3P34903 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
GABRA3P34903 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.69■□□□□ 0.9
GABRA3P34903 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA3P34903 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA3P34903 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA3P34903 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA3P34903 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA3P34903 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA3P34903 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
GABRA3P34903 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA3P34903 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.68■□□□□ 0.9
GABRA3P34903 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA3P34903 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.68■□□□□ 0.9
GABRA3P34903 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA3P34903 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA3P34903 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
GABRA3P34903 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA3P34903 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA3P34903 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABRA3P34903 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABRA3P34903 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GABRA3P34903 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.67■□□□□ 0.9
GABRA3P34903 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABRA3P34903 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GABRA3P34903 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.67■□□□□ 0.9
GABRA3P34903 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GABRA3P34903 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.67■□□□□ 0.9
GABRA3P34903 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
GABRA3P34903 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GABRA3P34903 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
GABRA3P34903 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
GABRA3P34903 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GABRA3P34903 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.67■□□□□ 0.9
GABRA3P34903 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA3P34903 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GABRA3P34903 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA3P34903 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GABRA3P34903 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GABRA3P34903 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.66■□□□□ 0.9
GABRA3P34903 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA3P34903 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.66■□□□□ 0.9
GABRA3P34903 DUX4L4-201ENST00000566884 1269 ntBASIC20.66■□□□□ 0.9
GABRA3P34903 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.66■□□□□ 0.9
GABRA3P34903 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.66■□□□□ 0.9
GABRA3P34903 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.66■□□□□ 0.9
GABRA3P34903 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA3P34903 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.66■□□□□ 0.9
GABRA3P34903 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.66■□□□□ 0.9
GABRA3P34903 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.66■□□□□ 0.9
GABRA3P34903 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GABRA3P34903 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.66■□□□□ 0.9
GABRA3P34903 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GABRA3P34903 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA3P34903 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA3P34903 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms