Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H1DP16402 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H1DP16402 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.93■□□□□ 0.62
HIST1H1DP16402 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.93■□□□□ 0.62
HIST1H1DP16402 U85056.1-201ENST00000616429 682 ntBASIC18.93■□□□□ 0.62
HIST1H1DP16402 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.93■□□□□ 0.62
HIST1H1DP16402 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H1DP16402 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST1H1DP16402 AC007375.3-201ENST00000600936 2314 ntBASIC18.92■□□□□ 0.62
HIST1H1DP16402 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HIST1H1DP16402 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H1DP16402 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H1DP16402 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.92■□□□□ 0.62
HIST1H1DP16402 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.92■□□□□ 0.62
HIST1H1DP16402 AC139530.1-201ENST00000575312 1977 ntBASIC18.92■□□□□ 0.62
HIST1H1DP16402 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H1DP16402 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
HIST1H1DP16402 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H1DP16402 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H1DP16402 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.92■□□□□ 0.62
HIST1H1DP16402 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.92■□□□□ 0.62
HIST1H1DP16402 AC092053.2-201ENST00000640557 1818 ntBASIC18.92■□□□□ 0.62
HIST1H1DP16402 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIST1H1DP16402 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.92■□□□□ 0.62
HIST1H1DP16402 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
HIST1H1DP16402 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST1H1DP16402 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H1DP16402 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.91■□□□□ 0.62
HIST1H1DP16402 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.91■□□□□ 0.62
HIST1H1DP16402 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HIST1H1DP16402 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H1DP16402 RARRES2P2-201ENST00000394842 485 ntBASIC18.91■□□□□ 0.62
HIST1H1DP16402 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H1DP16402 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HIST1H1DP16402 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H1DP16402 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HIST1H1DP16402 PKD1P6-201ENST00000343738 4769 ntBASIC18.91■□□□□ 0.62
HIST1H1DP16402 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HIST1H1DP16402 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST1H1DP16402 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.9■□□□□ 0.62
HIST1H1DP16402 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1DP16402 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1DP16402 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1DP16402 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1DP16402 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1DP16402 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.9■□□□□ 0.62
HIST1H1DP16402 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HIST1H1DP16402 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.9■□□□□ 0.62
HIST1H1DP16402 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1DP16402 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1DP16402 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.9■□□□□ 0.62
HIST1H1DP16402 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
HIST1H1DP16402 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HIST1H1DP16402 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HIST1H1DP16402 AF131216.4-201ENST00000638924 1588 ntBASIC18.89■□□□□ 0.62
HIST1H1DP16402 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1DP16402 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1DP16402 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 C11orf96-202ENST00000528572 1834 ntBASIC18.89■□□□□ 0.61
HIST1H1DP16402 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 AC120024.1-201ENST00000562672 995 ntBASIC18.89■□□□□ 0.61
HIST1H1DP16402 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1DP16402 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1DP16402 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1DP16402 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HIST1H1DP16402 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1DP16402 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST1H1DP16402 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
HIST1H1DP16402 KRT18P60-201ENST00000312876 1297 ntBASIC18.88■□□□□ 0.61
HIST1H1DP16402 AC004448.1-201ENST00000458332 883 ntBASIC18.88■□□□□ 0.61
HIST1H1DP16402 AC139795.1-202ENST00000500444 432 ntBASIC18.88■□□□□ 0.61
HIST1H1DP16402 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HIST1H1DP16402 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1DP16402 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1DP16402 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST1H1DP16402 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1DP16402 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1DP16402 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1DP16402 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1DP16402 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1DP16402 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HIST1H1DP16402 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HIST1H1DP16402 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1DP16402 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST1H1DP16402 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST1H1DP16402 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HIST1H1DP16402 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1DP16402 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HIST1H1DP16402 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST1H1DP16402 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HIST1H1DP16402 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1DP16402 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms