Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NID1P14543 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NID1P14543 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NID1P14543 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NID1P14543 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NID1P14543 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.56■□□□□ 0.88
NID1P14543 AC010997.5-201ENST00000609182 354 ntBASIC20.56■□□□□ 0.88
NID1P14543 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.56■□□□□ 0.88
NID1P14543 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.56■□□□□ 0.88
NID1P14543 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NID1P14543 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.56■□□□□ 0.88
NID1P14543 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NID1P14543 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NID1P14543 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NID1P14543 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NID1P14543 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.55■□□□□ 0.88
NID1P14543 TSPY9P-201ENST00000440215 945 ntBASIC20.55■□□□□ 0.88
NID1P14543 TSPY11P-201ENST00000442607 1045 ntBASIC20.55■□□□□ 0.88
NID1P14543 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NID1P14543 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NID1P14543 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NID1P14543 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.55■□□□□ 0.88
NID1P14543 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.55■□□□□ 0.88
NID1P14543 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.55■□□□□ 0.88
NID1P14543 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NID1P14543 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NID1P14543 AC233723.2-201ENST00000623798 2106 ntBASIC20.54■□□□□ 0.88
NID1P14543 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NID1P14543 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.54■□□□□ 0.88
NID1P14543 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.54■□□□□ 0.88
NID1P14543 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NID1P14543 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NID1P14543 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NID1P14543 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.54■□□□□ 0.88
NID1P14543 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NID1P14543 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.54■□□□□ 0.88
NID1P14543 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.54■□□□□ 0.88
NID1P14543 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NID1P14543 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NID1P14543 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NID1P14543 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NID1P14543 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NID1P14543 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NID1P14543 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NID1P14543 KRT16P3-201ENST00000439127 1283 ntBASIC20.53■□□□□ 0.88
NID1P14543 FP325331.1-202ENST00000623531 1380 ntBASIC20.53■□□□□ 0.88
NID1P14543 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.53■□□□□ 0.88
NID1P14543 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.53■□□□□ 0.88
NID1P14543 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NID1P14543 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NID1P14543 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
NID1P14543 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NID1P14543 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NID1P14543 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.52■□□□□ 0.88
NID1P14543 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NID1P14543 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.52■□□□□ 0.88
NID1P14543 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NID1P14543 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.52■□□□□ 0.88
NID1P14543 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.52■□□□□ 0.88
NID1P14543 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.52■□□□□ 0.88
NID1P14543 LINC01529-204ENST00000636474 1715 ntBASIC20.52■□□□□ 0.88
NID1P14543 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.52■□□□□ 0.88
NID1P14543 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NID1P14543 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NID1P14543 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.52■□□□□ 0.87
NID1P14543 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.51■□□□□ 0.87
NID1P14543 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NID1P14543 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NID1P14543 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.51■□□□□ 0.87
NID1P14543 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
NID1P14543 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.51■□□□□ 0.87
NID1P14543 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NID1P14543 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.51■□□□□ 0.87
NID1P14543 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
NID1P14543 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NID1P14543 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NID1P14543 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NID1P14543 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NID1P14543 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.5■□□□□ 0.87
NID1P14543 AL117328.2-201ENST00000624617 1940 ntBASIC20.5■□□□□ 0.87
NID1P14543 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NID1P14543 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NID1P14543 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NID1P14543 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NID1P14543 AC009102.2-201ENST00000606772 1639 ntBASIC20.49■□□□□ 0.87
NID1P14543 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NID1P14543 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.49■□□□□ 0.87
NID1P14543 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NID1P14543 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NID1P14543 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NID1P14543 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NID1P14543 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NID1P14543 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.49■□□□□ 0.87
NID1P14543 MIR6724-1-201ENST00000616420 92 ntBASIC20.49■□□□□ 0.87
NID1P14543 MIR6724-2-201ENST00000616483 92 ntBASIC20.49■□□□□ 0.87
NID1P14543 MIR6724-4-201ENST00000617390 92 ntBASIC20.49■□□□□ 0.87
NID1P14543 MIR6724-3-201ENST00000622482 92 ntBASIC20.49■□□□□ 0.87
NID1P14543 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NID1P14543 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NID1P14543 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms