Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGN1P05114 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGN1P05114 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.16■□□□□ 0.82
HMGN1P05114 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGN1P05114 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 AL353803.4-201ENST00000565882 1934 ntBASIC20.15■□□□□ 0.82
HMGN1P05114 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGN1P05114 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HMGN1P05114 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGN1P05114 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGN1P05114 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 DUX4L18-201ENST00000553347 1267 ntBASIC20.15■□□□□ 0.82
HMGN1P05114 THA1P-201ENST00000590384 1145 ntBASIC20.15■□□□□ 0.82
HMGN1P05114 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGN1P05114 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGN1P05114 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGN1P05114 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGN1P05114 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGN1P05114 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HMGN1P05114 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HMGN1P05114 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGN1P05114 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGN1P05114 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGN1P05114 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGN1P05114 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGN1P05114 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGN1P05114 MIR4281-201ENST00000580852 62 ntBASIC20.14■□□□□ 0.81
HMGN1P05114 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HMGN1P05114 AC074183.2-201ENST00000623112 922 ntBASIC20.14■□□□□ 0.81
HMGN1P05114 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGN1P05114 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.13■□□□□ 0.81
HMGN1P05114 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGN1P05114 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HMGN1P05114 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGN1P05114 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.13■□□□□ 0.81
HMGN1P05114 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HMGN1P05114 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGN1P05114 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGN1P05114 HSD17B1P1-201ENST00000590052 955 ntBASIC20.13■□□□□ 0.81
HMGN1P05114 BHLHE23-202ENST00000612929 1109 ntBASIC20.13■□□□□ 0.81
HMGN1P05114 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGN1P05114 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HMGN1P05114 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGN1P05114 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HMGN1P05114 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HMGN1P05114 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGN1P05114 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
HMGN1P05114 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.13■□□□□ 0.81
HMGN1P05114 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HMGN1P05114 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGN1P05114 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGN1P05114 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGN1P05114 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
HMGN1P05114 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HMGN1P05114 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGN1P05114 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HMGN1P05114 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.12■□□□□ 0.81
HMGN1P05114 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.12■□□□□ 0.81
HMGN1P05114 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.12■□□□□ 0.81
HMGN1P05114 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGN1P05114 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HMGN1P05114 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGN1P05114 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HMGN1P05114 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.12■□□□□ 0.81
HMGN1P05114 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HMGN1P05114 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGN1P05114 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
HMGN1P05114 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGN1P05114 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
HMGN1P05114 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGN1P05114 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGN1P05114 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGN1P05114 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGN1P05114 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.11■□□□□ 0.81
HMGN1P05114 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HMGN1P05114 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HMGN1P05114 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGN1P05114 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HMGN1P05114 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.1■□□□□ 0.81
HMGN1P05114 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGN1P05114 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGN1P05114 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms