Protein–RNA interactions for Protein: O95863

SNAI1, Zinc finger protein SNAI1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1O95863 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SNAI1O95863 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SNAI1O95863 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SNAI1O95863 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
SNAI1O95863 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SNAI1O95863 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SNAI1O95863 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.28■■□□□ 1.64
SNAI1O95863 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.28■■□□□ 1.64
SNAI1O95863 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.28■■□□□ 1.64
SNAI1O95863 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.28■■□□□ 1.64
SNAI1O95863 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.28■■□□□ 1.64
SNAI1O95863 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SNAI1O95863 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.28■■□□□ 1.64
SNAI1O95863 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SNAI1O95863 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SNAI1O95863 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SNAI1O95863 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.27■■□□□ 1.64
SNAI1O95863 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SNAI1O95863 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.27■■□□□ 1.64
SNAI1O95863 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SNAI1O95863 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.27■■□□□ 1.64
SNAI1O95863 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SNAI1O95863 TERF1P2-201ENST00000583350 1212 ntBASIC25.27■■□□□ 1.64
SNAI1O95863 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SNAI1O95863 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SNAI1O95863 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
SNAI1O95863 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.26■■□□□ 1.63
SNAI1O95863 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SNAI1O95863 AC138932.3-201ENST00000567634 1902 ntBASIC25.25■■□□□ 1.63
SNAI1O95863 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SNAI1O95863 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNAI1O95863 AC004911.1-201ENST00000416316 871 ntBASIC25.25■■□□□ 1.63
SNAI1O95863 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNAI1O95863 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SNAI1O95863 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNAI1O95863 KRT18P14-201ENST00000534205 1250 ntBASIC25.25■■□□□ 1.63
SNAI1O95863 NTF6G-201ENST00000591094 616 ntBASIC25.25■■□□□ 1.63
SNAI1O95863 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
SNAI1O95863 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNAI1O95863 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
SNAI1O95863 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.25■■□□□ 1.63
SNAI1O95863 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SNAI1O95863 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SNAI1O95863 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
SNAI1O95863 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.24■■□□□ 1.63
SNAI1O95863 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.24■■□□□ 1.63
SNAI1O95863 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.24■■□□□ 1.63
SNAI1O95863 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SNAI1O95863 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.24■■□□□ 1.63
SNAI1O95863 AP005435.1-201ENST00000529293 1178 ntBASIC25.24■■□□□ 1.63
SNAI1O95863 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SNAI1O95863 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.23■■□□□ 1.63
SNAI1O95863 AC144652.1-201ENST00000609974 1624 ntBASIC25.23■■□□□ 1.63
SNAI1O95863 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SNAI1O95863 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SNAI1O95863 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SNAI1O95863 LINC01529-204ENST00000636474 1715 ntBASIC25.23■■□□□ 1.63
SNAI1O95863 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SNAI1O95863 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
SNAI1O95863 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.22■■□□□ 1.63
SNAI1O95863 LINC02228-203ENST00000641970 1355 ntBASIC25.22■■□□□ 1.63
SNAI1O95863 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SNAI1O95863 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.22■■□□□ 1.63
SNAI1O95863 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.22■■□□□ 1.63
SNAI1O95863 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SNAI1O95863 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SNAI1O95863 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SNAI1O95863 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SNAI1O95863 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.21■■□□□ 1.63
SNAI1O95863 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SNAI1O95863 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SNAI1O95863 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
SNAI1O95863 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.21■■□□□ 1.63
SNAI1O95863 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SNAI1O95863 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.21■■□□□ 1.63
SNAI1O95863 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.21■■□□□ 1.63
SNAI1O95863 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.21■■□□□ 1.63
SNAI1O95863 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
SNAI1O95863 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SNAI1O95863 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SNAI1O95863 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SNAI1O95863 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.21■■□□□ 1.63
SNAI1O95863 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.21■■□□□ 1.63
SNAI1O95863 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SNAI1O95863 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
SNAI1O95863 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNAI1O95863 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SNAI1O95863 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNAI1O95863 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.2■■□□□ 1.62
SNAI1O95863 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms