Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PRICKLE3O43900 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE3O43900 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE3O43900 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.49■■□□□ 1.03
PRICKLE3O43900 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PRICKLE3O43900 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.49■■□□□ 1.03
PRICKLE3O43900 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PRICKLE3O43900 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.49■■□□□ 1.03
PRICKLE3O43900 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PRICKLE3O43900 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE3O43900 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.48■■□□□ 1.03
PRICKLE3O43900 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
PRICKLE3O43900 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PRICKLE3O43900 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE3O43900 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.48■■□□□ 1.03
PRICKLE3O43900 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE3O43900 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE3O43900 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PRICKLE3O43900 AL139246.5-201ENST00000606645 996 ntBASIC21.48■■□□□ 1.03
PRICKLE3O43900 pRNA.6-201ENST00000610482 90 ntBASIC21.48■■□□□ 1.03
PRICKLE3O43900 pRNA.5-201ENST00000612139 90 ntBASIC21.48■■□□□ 1.03
PRICKLE3O43900 pRNA.11-201ENST00000618423 90 ntBASIC21.48■■□□□ 1.03
PRICKLE3O43900 pRNA.13-201ENST00000619112 90 ntBASIC21.48■■□□□ 1.03
PRICKLE3O43900 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.48■■□□□ 1.03
PRICKLE3O43900 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE3O43900 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE3O43900 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PRICKLE3O43900 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.47■■□□□ 1.03
PRICKLE3O43900 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.47■■□□□ 1.03
PRICKLE3O43900 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.47■■□□□ 1.03
PRICKLE3O43900 DUSP8P3-201ENST00000399571 1760 ntBASIC21.47■■□□□ 1.03
PRICKLE3O43900 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.47■■□□□ 1.03
PRICKLE3O43900 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE3O43900 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE3O43900 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE3O43900 AL136162.1-201ENST00000607711 1078 ntBASIC21.47■■□□□ 1.03
PRICKLE3O43900 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE3O43900 AC011298.3-201ENST00000615796 283 ntBASIC21.47■■□□□ 1.03
PRICKLE3O43900 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE3O43900 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE3O43900 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.47■■□□□ 1.03
PRICKLE3O43900 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE3O43900 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE3O43900 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE3O43900 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE3O43900 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.46■■□□□ 1.03
PRICKLE3O43900 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE3O43900 AC024257.2-201ENST00000549699 147 ntBASIC21.46■■□□□ 1.03
PRICKLE3O43900 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.46■■□□□ 1.03
PRICKLE3O43900 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.46■■□□□ 1.03
PRICKLE3O43900 AC106739.1-201ENST00000617035 715 ntBASIC21.46■■□□□ 1.03
PRICKLE3O43900 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.46■■□□□ 1.03
PRICKLE3O43900 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PRICKLE3O43900 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE3O43900 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE3O43900 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE3O43900 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.46■■□□□ 1.03
PRICKLE3O43900 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.46■■□□□ 1.03
PRICKLE3O43900 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PRICKLE3O43900 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PRICKLE3O43900 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PRICKLE3O43900 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.45■■□□□ 1.02
PRICKLE3O43900 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.45■■□□□ 1.02
PRICKLE3O43900 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE3O43900 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.45■■□□□ 1.02
PRICKLE3O43900 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE3O43900 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.45■■□□□ 1.02
PRICKLE3O43900 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.45■■□□□ 1.02
PRICKLE3O43900 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.45■■□□□ 1.02
PRICKLE3O43900 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.45■■□□□ 1.02
PRICKLE3O43900 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE3O43900 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.45■■□□□ 1.02
PRICKLE3O43900 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE3O43900 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.44■■□□□ 1.02
PRICKLE3O43900 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.44■■□□□ 1.02
PRICKLE3O43900 PBX2P1-201ENST00000493219 1291 ntBASIC21.44■■□□□ 1.02
PRICKLE3O43900 AC135279.3-201ENST00000610945 1311 ntBASIC21.44■■□□□ 1.02
PRICKLE3O43900 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.44■■□□□ 1.02
PRICKLE3O43900 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE3O43900 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PRICKLE3O43900 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.44■■□□□ 1.02
PRICKLE3O43900 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE3O43900 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE3O43900 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms