Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYRM1O43325 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.19■□□□□ 0.66
LYRM1O43325 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYRM1O43325 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYRM1O43325 AC080038.3-201ENST00000623346 1952 ntBASIC19.19■□□□□ 0.66
LYRM1O43325 RNF165-205ENST00000588679 2904 ntBASIC19.19■□□□□ 0.66
LYRM1O43325 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.19■□□□□ 0.66
LYRM1O43325 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYRM1O43325 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYRM1O43325 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LYRM1O43325 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYRM1O43325 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYRM1O43325 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYRM1O43325 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.18■□□□□ 0.66
LYRM1O43325 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYRM1O43325 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.18■□□□□ 0.66
LYRM1O43325 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.18■□□□□ 0.66
LYRM1O43325 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYRM1O43325 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYRM1O43325 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LYRM1O43325 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYRM1O43325 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
LYRM1O43325 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LYRM1O43325 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYRM1O43325 HLA-V-202ENST00000446817 847 ntBASIC19.17■□□□□ 0.66
LYRM1O43325 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.17■□□□□ 0.66
LYRM1O43325 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.17■□□□□ 0.66
LYRM1O43325 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.17■□□□□ 0.66
LYRM1O43325 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
LYRM1O43325 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.17■□□□□ 0.66
LYRM1O43325 AC087741.3-201ENST00000624270 1347 ntBASIC19.17■□□□□ 0.66
LYRM1O43325 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYRM1O43325 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYRM1O43325 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYRM1O43325 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
LYRM1O43325 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYRM1O43325 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.16■□□□□ 0.66
LYRM1O43325 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LYRM1O43325 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.16■□□□□ 0.66
LYRM1O43325 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LYRM1O43325 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM1O43325 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM1O43325 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM1O43325 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM1O43325 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM1O43325 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM1O43325 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LYRM1O43325 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM1O43325 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
LYRM1O43325 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.15■□□□□ 0.66
LYRM1O43325 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.15■□□□□ 0.66
LYRM1O43325 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LYRM1O43325 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM1O43325 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM1O43325 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LYRM1O43325 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LYRM1O43325 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 DUX4L29-201ENST00000425409 679 ntBASIC19.14■□□□□ 0.65
LYRM1O43325 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.14■□□□□ 0.65
LYRM1O43325 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LYRM1O43325 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
LYRM1O43325 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM1O43325 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.14■□□□□ 0.65
LYRM1O43325 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
LYRM1O43325 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.13■□□□□ 0.65
LYRM1O43325 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYRM1O43325 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYRM1O43325 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYRM1O43325 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
LYRM1O43325 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYRM1O43325 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYRM1O43325 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
LYRM1O43325 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms