Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.29■■□□□ 1.16
COPEO14579 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COPEO14579 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPEO14579 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPEO14579 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPEO14579 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.28■■□□□ 1.16
COPEO14579 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPEO14579 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPEO14579 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.28■■□□□ 1.16
COPEO14579 U85056.1-201ENST00000616429 682 ntBASIC22.28■■□□□ 1.16
COPEO14579 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPEO14579 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPEO14579 AC007375.3-201ENST00000600936 2314 ntBASIC22.28■■□□□ 1.16
COPEO14579 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COPEO14579 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.27■■□□□ 1.16
COPEO14579 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COPEO14579 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
COPEO14579 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
COPEO14579 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COPEO14579 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COPEO14579 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.27■■□□□ 1.16
COPEO14579 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.27■■□□□ 1.16
COPEO14579 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
COPEO14579 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COPEO14579 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COPEO14579 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
COPEO14579 AL353803.4-201ENST00000565882 1934 ntBASIC22.27■■□□□ 1.16
COPEO14579 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COPEO14579 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COPEO14579 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
COPEO14579 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COPEO14579 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
COPEO14579 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COPEO14579 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COPEO14579 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.26■■□□□ 1.15
COPEO14579 AC019171.1-201ENST00000601251 1056 ntBASIC22.26■■□□□ 1.15
COPEO14579 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
COPEO14579 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COPEO14579 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.26■■□□□ 1.15
COPEO14579 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COPEO14579 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.26■■□□□ 1.15
COPEO14579 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.25■■□□□ 1.15
COPEO14579 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPEO14579 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.25■■□□□ 1.15
COPEO14579 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COPEO14579 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPEO14579 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPEO14579 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
COPEO14579 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.25■■□□□ 1.15
COPEO14579 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COPEO14579 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPEO14579 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPEO14579 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.24■■□□□ 1.15
COPEO14579 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COPEO14579 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COPEO14579 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
COPEO14579 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COPEO14579 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.24■■□□□ 1.15
COPEO14579 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COPEO14579 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COPEO14579 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.24■■□□□ 1.15
COPEO14579 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.24■■□□□ 1.15
COPEO14579 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COPEO14579 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COPEO14579 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
COPEO14579 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COPEO14579 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.23■■□□□ 1.15
COPEO14579 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.23■■□□□ 1.15
COPEO14579 AC092053.2-201ENST00000640557 1818 ntBASIC22.23■■□□□ 1.15
COPEO14579 RARRES2P2-201ENST00000394842 485 ntBASIC22.23■■□□□ 1.15
COPEO14579 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
COPEO14579 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.23■■□□□ 1.15
COPEO14579 AC139530.1-201ENST00000575312 1977 ntBASIC22.23■■□□□ 1.15
COPEO14579 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
COPEO14579 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPEO14579 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
COPEO14579 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPEO14579 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPEO14579 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.22■■□□□ 1.15
COPEO14579 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.22■■□□□ 1.15
COPEO14579 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
COPEO14579 AC139795.1-202ENST00000500444 432 ntBASIC22.22■■□□□ 1.15
COPEO14579 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.22■■□□□ 1.15
COPEO14579 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPEO14579 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPEO14579 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.22■■□□□ 1.15
COPEO14579 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.21■■□□□ 1.15
COPEO14579 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COPEO14579 KRT18P60-201ENST00000312876 1297 ntBASIC22.21■■□□□ 1.15
COPEO14579 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COPEO14579 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
COPEO14579 AC120024.1-201ENST00000562672 995 ntBASIC22.21■■□□□ 1.15
COPEO14579 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
COPEO14579 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.21■■□□□ 1.15
COPEO14579 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COPEO14579 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
COPEO14579 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.21■■□□□ 1.15
COPEO14579 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPEO14579 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPEO14579 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 776.9 ms