Protein–RNA interactions for Protein: O00746

NME4, Nucleoside diphosphate kinase, mitochondrial, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME4O00746 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NME4O00746 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.15■□□□□ 0.98
NME4O00746 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NME4O00746 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.15■□□□□ 0.98
NME4O00746 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.14■□□□□ 0.98
NME4O00746 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NME4O00746 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.14■□□□□ 0.98
NME4O00746 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.14■□□□□ 0.98
NME4O00746 RNF126P1-201ENST00000567452 1320 ntBASIC21.14■□□□□ 0.97
NME4O00746 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NME4O00746 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME4O00746 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.14■□□□□ 0.97
NME4O00746 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME4O00746 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME4O00746 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME4O00746 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME4O00746 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME4O00746 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.14■□□□□ 0.97
NME4O00746 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME4O00746 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME4O00746 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NME4O00746 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NME4O00746 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
NME4O00746 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME4O00746 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.13■□□□□ 0.97
NME4O00746 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME4O00746 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.13■□□□□ 0.97
NME4O00746 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME4O00746 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
NME4O00746 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME4O00746 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NME4O00746 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.12■□□□□ 0.97
NME4O00746 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME4O00746 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.12■□□□□ 0.97
NME4O00746 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.12■□□□□ 0.97
NME4O00746 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME4O00746 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME4O00746 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME4O00746 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME4O00746 FBXW4P1-201ENST00000426721 2239 ntBASIC21.12■□□□□ 0.97
NME4O00746 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NME4O00746 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NME4O00746 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.11■□□□□ 0.97
NME4O00746 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME4O00746 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NME4O00746 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.11■□□□□ 0.97
NME4O00746 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NME4O00746 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.11■□□□□ 0.97
NME4O00746 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.11■□□□□ 0.97
NME4O00746 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME4O00746 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NME4O00746 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME4O00746 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NME4O00746 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
NME4O00746 AC087742.1-201ENST00000575880 1738 ntBASIC21.1■□□□□ 0.97
NME4O00746 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.1■□□□□ 0.97
NME4O00746 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NME4O00746 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.1■□□□□ 0.97
NME4O00746 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NME4O00746 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.1■□□□□ 0.97
NME4O00746 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NME4O00746 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME4O00746 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.09■□□□□ 0.97
NME4O00746 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NME4O00746 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NME4O00746 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.09■□□□□ 0.97
NME4O00746 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME4O00746 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME4O00746 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NME4O00746 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME4O00746 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME4O00746 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NME4O00746 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.08■□□□□ 0.96
NME4O00746 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NME4O00746 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NME4O00746 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NME4O00746 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.07■□□□□ 0.96
NME4O00746 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME4O00746 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NME4O00746 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.07■□□□□ 0.96
NME4O00746 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.07■□□□□ 0.96
NME4O00746 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.07■□□□□ 0.96
NME4O00746 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.07■□□□□ 0.96
NME4O00746 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.07■□□□□ 0.96
NME4O00746 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NME4O00746 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.06■□□□□ 0.96
NME4O00746 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NME4O00746 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NME4O00746 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NME4O00746 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NME4O00746 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.06■□□□□ 0.96
NME4O00746 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NME4O00746 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME4O00746 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME4O00746 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NME4O00746 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME4O00746 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NME4O00746 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.05■□□□□ 0.96
NME4O00746 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.05■□□□□ 0.96
NME4O00746 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms