Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.03■□□□□ 0.64
TMEM235A6NFC5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TMEM235A6NFC5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM235A6NFC5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM235A6NFC5 AC011551.1-201ENST00000614101 683 ntBASIC19.03■□□□□ 0.64
TMEM235A6NFC5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM235A6NFC5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM235A6NFC5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM235A6NFC5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM235A6NFC5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM235A6NFC5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM235A6NFC5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.02■□□□□ 0.63
TMEM235A6NFC5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 LONRF2P2-201ENST00000439212 571 ntBASIC19.01■□□□□ 0.63
TMEM235A6NFC5 DUX4L9-201ENST00000449051 1259 ntBASIC19.01■□□□□ 0.63
TMEM235A6NFC5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM235A6NFC5 AC139530.1-201ENST00000575312 1977 ntBASIC19.01■□□□□ 0.63
TMEM235A6NFC5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19■□□□□ 0.63
TMEM235A6NFC5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TMEM235A6NFC5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TMEM235A6NFC5 MIR4449-201ENST00000578365 66 ntBASIC19■□□□□ 0.63
TMEM235A6NFC5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19■□□□□ 0.63
TMEM235A6NFC5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 C11orf96-202ENST00000528572 1834 ntBASIC19■□□□□ 0.63
TMEM235A6NFC5 AC092053.2-201ENST00000640557 1818 ntBASIC19■□□□□ 0.63
TMEM235A6NFC5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM235A6NFC5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TMEM235A6NFC5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM235A6NFC5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.98■□□□□ 0.63
TMEM235A6NFC5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 AL024507.2-201ENST00000606070 2574 ntBASIC18.97■□□□□ 0.63
TMEM235A6NFC5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 RNF126P1-201ENST00000567452 1320 ntBASIC18.97■□□□□ 0.63
TMEM235A6NFC5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM235A6NFC5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM235A6NFC5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
TMEM235A6NFC5 AL353803.4-201ENST00000565882 1934 ntBASIC18.96■□□□□ 0.63
TMEM235A6NFC5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TMEM235A6NFC5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM235A6NFC5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM235A6NFC5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM235A6NFC5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms