Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRDV1A0A1B0GX56 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRDV1A0A1B0GX56 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRDV1A0A1B0GX56 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRDV1A0A1B0GX56 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 AC026310.3-201ENST00000625186 2373 ntBASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRDV1A0A1B0GX56 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRDV1A0A1B0GX56 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.64■□□□□ 0.73
TRDV1A0A1B0GX56 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRDV1A0A1B0GX56 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.64■□□□□ 0.73
TRDV1A0A1B0GX56 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRDV1A0A1B0GX56 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRDV1A0A1B0GX56 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRDV1A0A1B0GX56 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRDV1A0A1B0GX56 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRDV1A0A1B0GX56 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
TRDV1A0A1B0GX56 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 AL353803.4-201ENST00000565882 1934 ntBASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRDV1A0A1B0GX56 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 AC087742.1-201ENST00000575880 1738 ntBASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 ABHD17AP4-201ENST00000411545 909 ntBASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.6■□□□□ 0.73
TRDV1A0A1B0GX56 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRDV1A0A1B0GX56 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRDV1A0A1B0GX56 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRDV1A0A1B0GX56 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRDV1A0A1B0GX56 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.59■□□□□ 0.73
TRDV1A0A1B0GX56 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRDV1A0A1B0GX56 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRDV1A0A1B0GX56 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms