Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 AP005435.1-201ENST00000529293 1178 ntBASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 AC010525.1-201ENST00000585559 441 ntBASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV17A0A0B4J275 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 MIR6084-201ENST00000622012 110 ntBASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV17A0A0B4J275 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 AL031602.1-201ENST00000633169 911 ntBASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV17A0A0B4J275 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 KRT18P5-201ENST00000436075 1291 ntBASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV17A0A0B4J275 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 DUX4L2-201ENST00000561772 1275 ntBASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 DUX4L6-201ENST00000626483 1275 ntBASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 DUX4L1-201ENST00000627662 1275 ntBASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 DUX4L8-201ENST00000629013 1275 ntBASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 DUX4L3-201ENST00000630187 1275 ntBASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 DUX4L7-201ENST00000630678 1275 ntBASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 DUX4L5-201ENST00000630834 1275 ntBASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV17A0A0B4J275 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV17A0A0B4J275 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV17A0A0B4J275 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 AC022517.1-201ENST00000592429 346 ntBASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV17A0A0B4J275 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms