Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 MIR1247-201ENST00000408206 136 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 GPAA1P2-201ENST00000417923 928 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 AC104306.2-201ENST00000451877 341 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 EIF4HP1-201ENST00000453115 687 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 TUBB8P8-201ENST00000458717 1058 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 CHCHD2P2-201ENST00000503744 321 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 AC005324.6-201ENST00000587972 613 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 AP000346.4-201ENST00000614827 381 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 KRT8P29-201ENST00000420409 1371 ntBASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AMBRA1Q9C0C7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 CTAGE10P-201ENST00000318353 2408 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 SLC25A24P2-201ENST00000415059 510 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC011742.3-201ENST00000439053 820 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 KRT8P13-201ENST00000463294 1010 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 HLA-J-204ENST00000495278 958 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC126915.1-201ENST00000522847 1038 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 RHOQP1-201ENST00000555758 579 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC005730.2-201ENST00000564549 1184 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AL022328.3-201ENST00000607943 679 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC007663.3-201ENST00000609632 465 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC022748.3-201ENST00000621828 275 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC011700.1-201ENST00000610409 2627 ntBASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AMBRA1Q9C0C7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms