Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC091544.8-201ENST00000619490 361 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AC011491.1-203ENST00000637688 543 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 AC006144.1-201ENST00000424220 1600 ntBASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
RSPO3Q9BXY4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AFG3L2P1-201ENST00000521792 1763 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AL583805.1-201ENST00000391389 531 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 RN7SL67P-201ENST00000492147 296 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC092658.1-201ENST00000505836 891 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC008723.1-201ENST00000506922 207 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 PIGCP1-201ENST00000527583 895 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC007326.1-201ENST00000604539 458 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 TRIM80P-201ENST00000455685 2848 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 AL139385.1-201ENST00000611744 3272 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.56□□□□□ -0.4
RSPO3Q9BXY4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AC117503.4-201ENST00000623229 1418 ntBASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms