Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC16.14■□□□□ 0.18
STAG1Q8WVM7 AC007336.3-201ENST00000623886 2160 ntBASIC16.14■□□□□ 0.17
STAG1Q8WVM7 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 AC097065.1-201ENST00000425737 517 ntBASIC16.14■□□□□ 0.17
STAG1Q8WVM7 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 AC012531.1-201ENST00000562848 2680 ntBASIC16.14■□□□□ 0.17
STAG1Q8WVM7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
STAG1Q8WVM7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 TUBB2BP1-201ENST00000404155 871 ntBASIC16.13■□□□□ 0.17
STAG1Q8WVM7 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 AL355334.1-201ENST00000417713 215 ntBASIC16.13■□□□□ 0.17
STAG1Q8WVM7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 PIGCP1-201ENST00000527583 895 ntBASIC16.13■□□□□ 0.17
STAG1Q8WVM7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 AC013553.1-201ENST00000560906 267 ntBASIC16.13■□□□□ 0.17
STAG1Q8WVM7 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 Z82244.1-201ENST00000631502 840 ntBASIC16.13■□□□□ 0.17
STAG1Q8WVM7 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 CTBP2P8-201ENST00000422584 1330 ntBASIC16.13■□□□□ 0.17
STAG1Q8WVM7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
STAG1Q8WVM7 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 EGLN3-205ENST00000547327 2849 ntBASIC16.12■□□□□ 0.17
STAG1Q8WVM7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
STAG1Q8WVM7 CFL1P6-201ENST00000400899 494 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms