Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC17.45■□□□□ 0.38
CHL1O00533 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC17.45■□□□□ 0.38
CHL1O00533 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHL1O00533 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHL1O00533 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHL1O00533 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 AC034205.3-201ENST00000603595 1376 ntBASIC17.44■□□□□ 0.38
CHL1O00533 AC063926.3-201ENST00000624734 5658 ntBASIC17.44■□□□□ 0.38
CHL1O00533 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.44■□□□□ 0.38
CHL1O00533 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
CHL1O00533 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
CHL1O00533 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CHL1O00533 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 SDCBP2P1-201ENST00000416115 614 ntBASIC17.44■□□□□ 0.38
CHL1O00533 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC17.44■□□□□ 0.38
CHL1O00533 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC17.44■□□□□ 0.38
CHL1O00533 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC17.44■□□□□ 0.38
CHL1O00533 AC026470.1-201ENST00000478038 846 ntBASIC17.44■□□□□ 0.38
CHL1O00533 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.44■□□□□ 0.38
CHL1O00533 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
CHL1O00533 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC17.44■□□□□ 0.38
CHL1O00533 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC17.44■□□□□ 0.38
CHL1O00533 AC211476.2-201ENST00000608799 708 ntBASIC17.44■□□□□ 0.38
CHL1O00533 AC138466.4-201ENST00000623965 852 ntBASIC17.44■□□□□ 0.38
CHL1O00533 DUX4L33-201ENST00000635217 958 ntBASIC17.44■□□□□ 0.38
CHL1O00533 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHL1O00533 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.44■□□□□ 0.38
CHL1O00533 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHL1O00533 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 RBM22P2-201ENST00000393978 1814 ntBASIC17.44■□□□□ 0.38
CHL1O00533 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.44■□□□□ 0.38
CHL1O00533 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.44■□□□□ 0.38
CHL1O00533 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.44■□□□□ 0.38
CHL1O00533 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHL1O00533 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHL1O00533 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHL1O00533 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC17.43■□□□□ 0.38
CHL1O00533 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CHL1O00533 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 VENTXP4-201ENST00000449029 958 ntBASIC17.43■□□□□ 0.38
CHL1O00533 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC17.43■□□□□ 0.38
CHL1O00533 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 RNA5SP420-201ENST00000516997 137 ntBASIC17.43■□□□□ 0.38
CHL1O00533 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.43■□□□□ 0.38
CHL1O00533 AC078814.4-201ENST00000546650 327 ntBASIC17.43■□□□□ 0.38
CHL1O00533 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHL1O00533 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC17.43■□□□□ 0.38
CHL1O00533 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 RN7SL162P-201ENST00000579233 292 ntBASIC17.43■□□□□ 0.38
CHL1O00533 LINC00643-207ENST00000637212 734 ntBASIC17.43■□□□□ 0.38
CHL1O00533 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHL1O00533 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.43■□□□□ 0.38
CHL1O00533 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHL1O00533 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHL1O00533 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHL1O00533 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC17.42■□□□□ 0.38
CHL1O00533 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHL1O00533 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms