Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.17□□□□□ -0.46
NPIPB4C9JG80 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AC244107.1-201ENST00000442033 332 ntBASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 CHCHD2P9-201ENST00000461726 456 ntBASIC12.17□□□□□ -0.46
NPIPB4C9JG80 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AL139099.5-201ENST00000635274 300 ntBASIC12.17□□□□□ -0.46
NPIPB4C9JG80 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
NPIPB4C9JG80 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AC083964.2-201ENST00000623988 2396 ntBASIC12.16□□□□□ -0.46
NPIPB4C9JG80 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 RNVU1-8-201ENST00000364272 125 ntBASIC12.16□□□□□ -0.46
NPIPB4C9JG80 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AL662890.1-201ENST00000396818 632 ntBASIC12.16□□□□□ -0.46
NPIPB4C9JG80 GUSBP10-201ENST00000417412 665 ntBASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 STK24P1-201ENST00000455035 1291 ntBASIC12.16□□□□□ -0.46
NPIPB4C9JG80 CEP164P1-201ENST00000455142 418 ntBASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AC130709.1-201ENST00000484779 1212 ntBASIC12.16□□□□□ -0.46
NPIPB4C9JG80 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NPIPB4C9JG80 AC084346.2-201ENST00000607097 949 ntBASIC12.16□□□□□ -0.46
NPIPB4C9JG80 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms