Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC074085.2-201ENST00000416734 428 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 INO80C-203ENST00000441607 904 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AQP7-207ENST00000447660 998 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 CMC2-202ENST00000486645 766 ntTSL 3 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 FOS-205ENST00000555242 629 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AD000091.1-201ENST00000592379 287 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 GH2-205ENST00000622506 702 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 TPM3P7-201ENST00000338274 732 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 RN7SKP102-201ENST00000411186 315 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 RPS15P5-201ENST00000449885 432 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 RN7SL452P-201ENST00000482923 291 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC110753.1-201ENST00000505711 1022 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC018755.1-201ENST00000601315 1182 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 AP006621.5-202ENST00000623692 636 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 RN7SL225P-201ENST00000464648 298 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC022966.2-201ENST00000587434 367 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AL139424.2-202ENST00000641335 1369 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 DDC-214ENST00000622873 1839 ntTSL 3 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 KRTAP9-10P-201ENST00000435672 207 ntBASIC8.81□□□□□ -1
VPS13DQ5THJ4 ACP1-207ENST00000439645 605 ntTSL 2 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 JPT1-205ENST00000470924 663 ntTSL 5 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 AC105424.1-201ENST00000514583 209 ntBASIC8.81□□□□□ -1
VPS13DQ5THJ4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 F2-205ENST00000530231 1849 ntTSL 5 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
VPS13DQ5THJ4 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
VPS13DQ5THJ4 BX005132.1-201ENST00000641403 1580 ntBASIC8.81□□□□□ -1
VPS13DQ5THJ4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms