Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP6P35125 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC18.12■□□□□ 0.49
USP6P35125 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
USP6P35125 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC18.12■□□□□ 0.49
USP6P35125 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
USP6P35125 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 AL591499.1-201ENST00000307155 1153 ntBASIC18.12■□□□□ 0.49
USP6P35125 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
USP6P35125 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC18.12■□□□□ 0.49
USP6P35125 AP000343.1-201ENST00000440602 385 ntBASIC18.12■□□□□ 0.49
USP6P35125 AC010395.2-201ENST00000509899 904 ntBASIC18.12■□□□□ 0.49
USP6P35125 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC18.12■□□□□ 0.49
USP6P35125 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC18.12■□□□□ 0.49
USP6P35125 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC18.12■□□□□ 0.49
USP6P35125 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC18.12■□□□□ 0.49
USP6P35125 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC18.12■□□□□ 0.49
USP6P35125 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP6P35125 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC18.12■□□□□ 0.49
USP6P35125 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC18.12■□□□□ 0.49
USP6P35125 AC008040.5-201ENST00000599781 1781 ntBASIC18.12■□□□□ 0.49
USP6P35125 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC18.12■□□□□ 0.49
USP6P35125 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
USP6P35125 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 FTO-214ENST00000636218 2227 ntTSL 5 BASIC18.11■□□□□ 0.49
USP6P35125 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC18.11■□□□□ 0.49
USP6P35125 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC18.11■□□□□ 0.49
USP6P35125 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
USP6P35125 HLF-202ENST00000430986 1385 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC18.11■□□□□ 0.49
USP6P35125 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 AP000346.2-202ENST00000425948 383 ntBASIC18.11■□□□□ 0.49
USP6P35125 AC010677.1-201ENST00000441690 412 ntBASIC18.11■□□□□ 0.49
USP6P35125 SRP9P1-201ENST00000445874 261 ntBASIC18.11■□□□□ 0.49
USP6P35125 RN7SL794P-201ENST00000469816 280 ntBASIC18.11■□□□□ 0.49
USP6P35125 RN7SL672P-201ENST00000474091 317 ntBASIC18.11■□□□□ 0.49
USP6P35125 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC18.11■□□□□ 0.49
USP6P35125 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 FAM213AP2-201ENST00000521579 683 ntBASIC18.11■□□□□ 0.49
USP6P35125 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC18.11■□□□□ 0.49
USP6P35125 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC18.11■□□□□ 0.49
USP6P35125 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC18.11■□□□□ 0.49
USP6P35125 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC18.11■□□□□ 0.49
USP6P35125 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
USP6P35125 FAM90A12P-201ENST00000519497 2375 ntBASIC18.11■□□□□ 0.49
USP6P35125 FAM90A24P-201ENST00000520792 2369 ntBASIC18.11■□□□□ 0.49
USP6P35125 NCLP1-201ENST00000445357 1963 ntBASIC18.11■□□□□ 0.49
USP6P35125 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
USP6P35125 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP6P35125 KRT8P5-201ENST00000592443 1458 ntBASIC18.11■□□□□ 0.49
USP6P35125 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP6P35125 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP6P35125 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC18.1■□□□□ 0.49
USP6P35125 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP6P35125 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC18.1■□□□□ 0.49
USP6P35125 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6P35125 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC18.1■□□□□ 0.49
USP6P35125 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC18.1■□□□□ 0.49
USP6P35125 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USP6P35125 RN7SL22P-201ENST00000471800 269 ntBASIC18.1■□□□□ 0.49
USP6P35125 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms