Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.9□□□□□ -0.51
CD40P25942 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.9□□□□□ -0.51
CD40P25942 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
CD40P25942 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 RCC2P5-201ENST00000492126 1487 ntBASIC11.89□□□□□ -0.51
CD40P25942 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CD40P25942 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC11.89□□□□□ -0.51
CD40P25942 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CD40P25942 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC11.89□□□□□ -0.51
CD40P25942 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC11.89□□□□□ -0.51
CD40P25942 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC11.89□□□□□ -0.51
CD40P25942 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC11.89□□□□□ -0.51
CD40P25942 AC041040.1-201ENST00000425197 460 ntBASIC11.89□□□□□ -0.51
CD40P25942 PSAT1P2-201ENST00000426107 972 ntBASIC11.89□□□□□ -0.51
CD40P25942 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC11.89□□□□□ -0.51
CD40P25942 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 GALP-202ENST00000440823 889 ntTSL 5 BASIC11.89□□□□□ -0.51
CD40P25942 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 AC017007.3-201ENST00000479865 435 ntBASIC11.89□□□□□ -0.51
CD40P25942 PFN2-212ENST00000490975 858 ntTSL 4 BASIC11.89□□□□□ -0.51
CD40P25942 PGAM1P12-201ENST00000505622 748 ntBASIC11.89□□□□□ -0.51
CD40P25942 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC11.89□□□□□ -0.51
CD40P25942 AC090136.2-201ENST00000517809 420 ntBASIC11.89□□□□□ -0.51
CD40P25942 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
CD40P25942 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC11.89□□□□□ -0.51
CD40P25942 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC11.89□□□□□ -0.51
CD40P25942 AC008972.2-201ENST00000606587 494 ntBASIC11.89□□□□□ -0.51
CD40P25942 AC006158.1-201ENST00000610661 249 ntBASIC11.89□□□□□ -0.51
CD40P25942 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.89□□□□□ -0.51
CD40P25942 REXO1L1P-201ENST00000379010 6598 ntBASIC11.89□□□□□ -0.51
CD40P25942 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 AL928921.2-201ENST00000641325 2442 ntBASIC11.89□□□□□ -0.51
CD40P25942 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
CD40P25942 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD40P25942 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CD40P25942 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CD40P25942 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CD40P25942 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CD40P25942 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 AC245140.2-201ENST00000624054 1939 ntBASIC11.88□□□□□ -0.51
CD40P25942 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.88□□□□□ -0.51
CD40P25942 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms