Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
POLR3DP05423 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
POLR3DP05423 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.53■□□□□ 0.24
POLR3DP05423 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
POLR3DP05423 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC16.52■□□□□ 0.24
POLR3DP05423 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
POLR3DP05423 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR3DP05423 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
POLR3DP05423 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.52■□□□□ 0.24
POLR3DP05423 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR3DP05423 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
POLR3DP05423 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.52■□□□□ 0.24
POLR3DP05423 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.52■□□□□ 0.24
POLR3DP05423 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR3DP05423 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR3DP05423 AC006529.1-201ENST00000459978 637 ntBASIC16.52■□□□□ 0.24
POLR3DP05423 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR3DP05423 AC025186.1-201ENST00000478174 870 ntBASIC16.52■□□□□ 0.24
POLR3DP05423 ALG1L6P-201ENST00000515248 758 ntBASIC16.52■□□□□ 0.24
POLR3DP05423 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 AC107918.4-201ENST00000641966 3141 ntBASIC16.52■□□□□ 0.24
POLR3DP05423 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR3DP05423 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.52■□□□□ 0.23
POLR3DP05423 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
POLR3DP05423 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
POLR3DP05423 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.52■□□□□ 0.23
POLR3DP05423 AC117503.4-201ENST00000623229 1418 ntBASIC16.52■□□□□ 0.23
POLR3DP05423 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR3DP05423 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
POLR3DP05423 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR3DP05423 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 AC093462.1-201ENST00000621167 1683 ntBASIC16.51■□□□□ 0.23
POLR3DP05423 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 AC108734.2-201ENST00000420887 1069 ntBASIC16.51■□□□□ 0.23
POLR3DP05423 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR3DP05423 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR3DP05423 KRT18P62-201ENST00000446618 1287 ntBASIC16.51■□□□□ 0.23
POLR3DP05423 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR3DP05423 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.51■□□□□ 0.23
POLR3DP05423 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR3DP05423 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR3DP05423 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR3DP05423 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
POLR3DP05423 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
POLR3DP05423 HLA-C-210ENST00000640219 976 ntBASIC16.51■□□□□ 0.23
POLR3DP05423 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR3DP05423 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR3DP05423 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR3DP05423 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
POLR3DP05423 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms