Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.37□□□□□ -0.43
APOA1P02647 DNAJB3-201ENST00000446806 729 ntBASIC12.37□□□□□ -0.43
APOA1P02647 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.37□□□□□ -0.43
APOA1P02647 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.37□□□□□ -0.43
APOA1P02647 AC069120.2-201ENST00000524091 540 ntBASIC12.37□□□□□ -0.43
APOA1P02647 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.37□□□□□ -0.43
APOA1P02647 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.37□□□□□ -0.43
APOA1P02647 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 AC008764.8-201ENST00000623966 2717 ntBASIC12.37□□□□□ -0.43
APOA1P02647 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 CLUHP2-201ENST00000426660 1303 ntBASIC12.37□□□□□ -0.43
APOA1P02647 AC106820.4-201ENST00000561847 5616 ntBASIC12.36□□□□□ -0.43
APOA1P02647 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
APOA1P02647 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 CTAGE13P-201ENST00000416709 2446 ntBASIC12.36□□□□□ -0.43
APOA1P02647 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.36□□□□□ -0.43
APOA1P02647 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
APOA1P02647 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.36□□□□□ -0.43
APOA1P02647 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.36□□□□□ -0.43
APOA1P02647 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.36□□□□□ -0.43
APOA1P02647 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.36□□□□□ -0.43
APOA1P02647 KRT126P-201ENST00000549467 1181 ntBASIC12.36□□□□□ -0.43
APOA1P02647 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.36□□□□□ -0.43
APOA1P02647 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.36□□□□□ -0.43
APOA1P02647 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.36□□□□□ -0.43
APOA1P02647 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.36□□□□□ -0.43
APOA1P02647 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 AC087164.2-201ENST00000624514 3130 ntBASIC12.36□□□□□ -0.43
APOA1P02647 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.36□□□□□ -0.43
APOA1P02647 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.36□□□□□ -0.43
APOA1P02647 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.36□□□□□ -0.43
APOA1P02647 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOA1P02647 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.35□□□□□ -0.43
APOA1P02647 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms