Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.62□□□□□ -0.39
RSPO3Q9BXY4 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AC118758.2-201ENST00000614242 2813 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 MIR1247-201ENST00000408206 136 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 DUTP3-201ENST00000450025 415 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AC012618.1-201ENST00000461223 412 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 NDUFS6P1-201ENST00000485187 316 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 COQ10BP2-201ENST00000513804 724 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 RN7SL219P-201ENST00000582872 296 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AC132812.1-201ENST00000583145 892 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AC007718.1-201ENST00000621078 280 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AC011700.1-201ENST00000610409 2627 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AL513497.1-201ENST00000624273 2083 ntBASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RSPO3Q9BXY4 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC138028.6-201ENST00000616106 1482 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 GPAA1P2-201ENST00000417923 928 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 RN7SL258P-201ENST00000478664 300 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 POU5F1P2-201ENST00000521750 823 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC024681.1-201ENST00000521917 487 ntBASIC12.6□□□□□ -0.39
RSPO3Q9BXY4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms