Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 BCRP1-201ENST00000444246 691 ntBASIC11.72□□□□□ -0.53
SSBP1Q04837 AC012441.2-201ENST00000444843 739 ntBASIC11.72□□□□□ -0.53
SSBP1Q04837 AL355864.2-201ENST00000447420 863 ntBASIC11.72□□□□□ -0.53
SSBP1Q04837 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.72□□□□□ -0.53
SSBP1Q04837 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 AC106794.1-201ENST00000506935 792 ntBASIC11.72□□□□□ -0.53
SSBP1Q04837 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.72□□□□□ -0.53
SSBP1Q04837 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.72□□□□□ -0.53
SSBP1Q04837 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.72□□□□□ -0.53
SSBP1Q04837 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.72□□□□□ -0.53
SSBP1Q04837 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSBP1Q04837 RBM22P2-201ENST00000393978 1814 ntBASIC11.72□□□□□ -0.53
SSBP1Q04837 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.72□□□□□ -0.53
SSBP1Q04837 AC144522.1-201ENST00000625111 1658 ntBASIC11.71□□□□□ -0.53
SSBP1Q04837 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SSBP1Q04837 AP002353.1-201ENST00000528257 1599 ntBASIC11.71□□□□□ -0.53
SSBP1Q04837 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.71□□□□□ -0.53
SSBP1Q04837 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SSBP1Q04837 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 KRT8P4-201ENST00000509735 1454 ntBASIC11.71□□□□□ -0.53
SSBP1Q04837 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.71□□□□□ -0.53
SSBP1Q04837 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 KRT18P36-201ENST00000411618 1276 ntBASIC11.71□□□□□ -0.53
SSBP1Q04837 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC11.71□□□□□ -0.53
SSBP1Q04837 SPTLC1P1-201ENST00000447199 261 ntBASIC11.71□□□□□ -0.53
SSBP1Q04837 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.71□□□□□ -0.53
SSBP1Q04837 SRP19-206ENST00000515463 660 ntTSL 3 BASIC11.71□□□□□ -0.53
SSBP1Q04837 TDH-203ENST00000531764 1110 ntBASIC11.71□□□□□ -0.53
SSBP1Q04837 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.71□□□□□ -0.53
SSBP1Q04837 MIR5189-201ENST00000577370 114 ntBASIC11.71□□□□□ -0.53
SSBP1Q04837 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 Z98259.2-201ENST00000641583 609 ntBASIC11.71□□□□□ -0.53
SSBP1Q04837 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.71□□□□□ -0.53
SSBP1Q04837 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
SSBP1Q04837 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SSBP1Q04837 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSBP1Q04837 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSBP1Q04837 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
SSBP1Q04837 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSBP1Q04837 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC11.71□□□□□ -0.54
SSBP1Q04837 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSBP1Q04837 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SSBP1Q04837 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSBP1Q04837 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SSBP1Q04837 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
SSBP1Q04837 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SSBP1Q04837 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SSBP1Q04837 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SSBP1Q04837 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC11.7□□□□□ -0.54
SSBP1Q04837 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSBP1Q04837 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSBP1Q04837 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SSBP1Q04837 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSBP1Q04837 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms