Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC022400.8-201ENST00000623453 3599 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 AC004923.1-202ENST00000642106 209 ntBASIC12.24□□□□□ -0.45
SEC61A1P61619 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC61A1P61619 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC61A1P61619 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC61A1P61619 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SEC61A1P61619 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SEC61A1P61619 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.23□□□□□ -0.45
SEC61A1P61619 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 IGHJ2P-201ENST00000454480 60 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.23□□□□□ -0.45
SEC61A1P61619 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC106794.1-201ENST00000506935 792 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 KRT18P8-201ENST00000581937 1246 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC005324.6-201ENST00000587972 613 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 AC008825.2-201ENST00000603374 718 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SEC61A1P61619 MIR6720-201ENST00000611664 98 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AC068587.8-201ENST00000641239 219 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 Z98259.2-201ENST00000641583 609 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 LINC02486-201ENST00000604157 3000 ntBASIC12.23□□□□□ -0.45
SEC61A1P61619 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SEC61A1P61619 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SEC61A1P61619 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
SEC61A1P61619 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC61A1P61619 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SEC61A1P61619 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms