Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RBP4-203ENST00000371469 814 ntTSL 5 BASIC16.8■□□□□ 0.28
PDE6BP35913 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDE6BP35913 CRIP1P2-201ENST00000425396 228 ntBASIC16.8■□□□□ 0.28
PDE6BP35913 IQCF4-203ENST00000428561 420 ntBASIC16.8■□□□□ 0.28
PDE6BP35913 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 RN7SL794P-201ENST00000469816 280 ntBASIC16.8■□□□□ 0.28
PDE6BP35913 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 FAM86JP-202ENST00000484500 988 ntBASIC16.8■□□□□ 0.28
PDE6BP35913 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 PIGCP1-201ENST00000527583 895 ntBASIC16.8■□□□□ 0.28
PDE6BP35913 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC16.8■□□□□ 0.28
PDE6BP35913 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC16.8■□□□□ 0.28
PDE6BP35913 CDC37P2-201ENST00000562287 1029 ntBASIC16.8■□□□□ 0.28
PDE6BP35913 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC16.8■□□□□ 0.28
PDE6BP35913 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC16.8■□□□□ 0.28
PDE6BP35913 AL512324.3-201ENST00000619383 882 ntBASIC16.8■□□□□ 0.28
PDE6BP35913 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.8■□□□□ 0.28
PDE6BP35913 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDE6BP35913 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.8■□□□□ 0.28
PDE6BP35913 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PDE6BP35913 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 BX640514.1-201ENST00000583223 1918 ntBASIC16.8■□□□□ 0.28
PDE6BP35913 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
PDE6BP35913 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDE6BP35913 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PDE6BP35913 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.79■□□□□ 0.28
PDE6BP35913 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PDE6BP35913 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
PDE6BP35913 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PDE6BP35913 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PDE6BP35913 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PDE6BP35913 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.79■□□□□ 0.28
PDE6BP35913 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PDE6BP35913 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 AL356653.1-201ENST00000402743 360 ntBASIC16.79■□□□□ 0.28
PDE6BP35913 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
PDE6BP35913 SNORD23-201ENST00000408876 110 ntBASIC16.79■□□□□ 0.28
PDE6BP35913 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC16.79■□□□□ 0.28
PDE6BP35913 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 KRT18P42-201ENST00000505048 1255 ntBASIC16.79■□□□□ 0.28
PDE6BP35913 AC114812.4-201ENST00000506676 757 ntBASIC16.79■□□□□ 0.28
PDE6BP35913 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.79■□□□□ 0.28
PDE6BP35913 AC090820.1-201ENST00000519722 591 ntBASIC16.79■□□□□ 0.28
PDE6BP35913 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 MST1L-204ENST00000545160 559 ntTSL 4 BASIC16.79■□□□□ 0.28
PDE6BP35913 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC16.79■□□□□ 0.28
PDE6BP35913 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC16.79■□□□□ 0.28
PDE6BP35913 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC16.79■□□□□ 0.28
PDE6BP35913 IFNL3P1-201ENST00000595082 501 ntBASIC16.79■□□□□ 0.28
PDE6BP35913 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC16.79■□□□□ 0.28
PDE6BP35913 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PDE6BP35913 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.79■□□□□ 0.28
PDE6BP35913 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.79■□□□□ 0.28
PDE6BP35913 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.79■□□□□ 0.28
PDE6BP35913 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDE6BP35913 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
PDE6BP35913 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.78■□□□□ 0.28
PDE6BP35913 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.78■□□□□ 0.28
PDE6BP35913 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDE6BP35913 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6BP35913 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDE6BP35913 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms