Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLCN1P35523 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCN1P35523 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.81■□□□□ 0.12
CLCN1P35523 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCN1P35523 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLCN1P35523 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CLCN1P35523 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCN1P35523 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCN1P35523 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCN1P35523 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCN1P35523 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCN1P35523 AC006453.4-201ENST00000636949 1252 ntBASIC15.81■□□□□ 0.12
CLCN1P35523 AL590440.2-201ENST00000641973 1595 ntBASIC15.81■□□□□ 0.12
CLCN1P35523 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CLCN1P35523 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CLCN1P35523 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN1P35523 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCN1P35523 AC018645.3-201ENST00000628855 2646 ntBASIC15.81■□□□□ 0.12
CLCN1P35523 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLCN1P35523 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLCN1P35523 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CLCN1P35523 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN1P35523 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCN1P35523 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCN1P35523 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.8■□□□□ 0.12
CLCN1P35523 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLCN1P35523 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CLCN1P35523 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
CLCN1P35523 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN1P35523 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCN1P35523 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCN1P35523 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCN1P35523 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 KRT90P-201ENST00000549264 1064 ntBASIC15.8■□□□□ 0.12
CLCN1P35523 MIR4683-201ENST00000579659 81 ntBASIC15.8■□□□□ 0.12
CLCN1P35523 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCN1P35523 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN1P35523 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN1P35523 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN1P35523 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLCN1P35523 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms