Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 MSNP1-201ENST00000511640 1732 ntBASIC14.04□□□□□ -0.16
CCND1P24385 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC14.04□□□□□ -0.16
CCND1P24385 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.03□□□□□ -0.16
CCND1P24385 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 AC104758.3-203ENST00000562938 2123 ntBASIC14.03□□□□□ -0.16
CCND1P24385 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCND1P24385 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC14.03□□□□□ -0.16
CCND1P24385 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC14.03□□□□□ -0.16
CCND1P24385 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CCND1P24385 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.03□□□□□ -0.16
CCND1P24385 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.03□□□□□ -0.16
CCND1P24385 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.03□□□□□ -0.16
CCND1P24385 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.03□□□□□ -0.16
CCND1P24385 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCND1P24385 PFN1P12-201ENST00000455938 534 ntBASIC14.03□□□□□ -0.16
CCND1P24385 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.03□□□□□ -0.16
CCND1P24385 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.03□□□□□ -0.16
CCND1P24385 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.03□□□□□ -0.16
CCND1P24385 AC124068.2-201ENST00000569473 1109 ntBASIC14.03□□□□□ -0.16
CCND1P24385 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.03□□□□□ -0.16
CCND1P24385 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.03□□□□□ -0.16
CCND1P24385 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.03□□□□□ -0.16
CCND1P24385 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.03□□□□□ -0.16
CCND1P24385 BNIP3P13-201ENST00000599968 566 ntBASIC14.03□□□□□ -0.16
CCND1P24385 AC007663.3-201ENST00000609632 465 ntBASIC14.03□□□□□ -0.16
CCND1P24385 AL591471.1-201ENST00000621855 229 ntBASIC14.03□□□□□ -0.16
CCND1P24385 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.03□□□□□ -0.16
CCND1P24385 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCND1P24385 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.03□□□□□ -0.16
CCND1P24385 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.03□□□□□ -0.16
CCND1P24385 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CCND1P24385 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 AC022364.1-202ENST00000617468 2409 ntBASIC14.03□□□□□ -0.16
CCND1P24385 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCND1P24385 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC14.03□□□□□ -0.16
CCND1P24385 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCND1P24385 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
CCND1P24385 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCND1P24385 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCND1P24385 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCND1P24385 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCND1P24385 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCND1P24385 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC14.02□□□□□ -0.16
CCND1P24385 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC14.02□□□□□ -0.16
CCND1P24385 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CCND1P24385 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCND1P24385 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCND1P24385 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CCND1P24385 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCND1P24385 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.02□□□□□ -0.17
CCND1P24385 BRWD1P1-201ENST00000401091 371 ntBASIC14.02□□□□□ -0.17
CCND1P24385 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.02□□□□□ -0.17
CCND1P24385 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.02□□□□□ -0.17
CCND1P24385 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCND1P24385 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCND1P24385 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.02□□□□□ -0.17
CCND1P24385 AC106794.1-201ENST00000506935 792 ntBASIC14.02□□□□□ -0.17
CCND1P24385 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.02□□□□□ -0.17
CCND1P24385 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.02□□□□□ -0.17
CCND1P24385 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.02□□□□□ -0.17
CCND1P24385 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.02□□□□□ -0.17
CCND1P24385 AC140658.4-201ENST00000561990 352 ntBASIC14.02□□□□□ -0.17
CCND1P24385 AC005730.2-201ENST00000564549 1184 ntBASIC14.02□□□□□ -0.17
CCND1P24385 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCND1P24385 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.02□□□□□ -0.17
CCND1P24385 AC104982.3-201ENST00000581995 514 ntBASIC14.02□□□□□ -0.17
CCND1P24385 AL008721.1-201ENST00000609964 604 ntBASIC14.02□□□□□ -0.17
CCND1P24385 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.02□□□□□ -0.17
CCND1P24385 AC005695.3-201ENST00000614522 232 ntBASIC14.02□□□□□ -0.17
CCND1P24385 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCND1P24385 AC090386.2-201ENST00000623010 1039 ntBASIC14.02□□□□□ -0.17
CCND1P24385 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.02□□□□□ -0.17
CCND1P24385 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCND1P24385 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CCND1P24385 AL928654.5-201ENST00000624831 2501 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms