Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 ERG-211ENST00000453032 1595 ntTSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SMAD6O43541 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.91□□□□□ -0.18
SMAD6O43541 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SMAD6O43541 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.91□□□□□ -0.18
SMAD6O43541 ZNF493-208ENST00000599461 1769 ntBASIC13.91□□□□□ -0.18
SMAD6O43541 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMAD6O43541 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 AC092115.1-201ENST00000566277 1402 ntBASIC13.9□□□□□ -0.18
SMAD6O43541 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.9□□□□□ -0.18
SMAD6O43541 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMAD6O43541 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.9□□□□□ -0.18
SMAD6O43541 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.9□□□□□ -0.18
SMAD6O43541 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SMAD6O43541 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.9□□□□□ -0.18
SMAD6O43541 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.9□□□□□ -0.18
SMAD6O43541 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.9□□□□□ -0.18
SMAD6O43541 AC006158.1-201ENST00000610661 249 ntBASIC13.9□□□□□ -0.18
SMAD6O43541 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.9□□□□□ -0.18
SMAD6O43541 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.9□□□□□ -0.18
SMAD6O43541 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMAD6O43541 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.9□□□□□ -0.18
SMAD6O43541 AC004623.1-201ENST00000624592 2127 ntBASIC13.9□□□□□ -0.18
SMAD6O43541 AC108024.1-201ENST00000626286 1721 ntBASIC13.9□□□□□ -0.18
SMAD6O43541 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.89□□□□□ -0.19
SMAD6O43541 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.89□□□□□ -0.19
SMAD6O43541 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.89□□□□□ -0.19
SMAD6O43541 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.89□□□□□ -0.19
SMAD6O43541 FAM21EP-201ENST00000417804 985 ntBASIC13.89□□□□□ -0.19
SMAD6O43541 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.89□□□□□ -0.19
SMAD6O43541 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.89□□□□□ -0.19
SMAD6O43541 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.89□□□□□ -0.19
SMAD6O43541 RN7SL396P-201ENST00000471086 295 ntBASIC13.89□□□□□ -0.19
SMAD6O43541 AC008026.2-201ENST00000495438 348 ntBASIC13.89□□□□□ -0.19
SMAD6O43541 PGAM1P12-201ENST00000505622 748 ntBASIC13.89□□□□□ -0.19
SMAD6O43541 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.89□□□□□ -0.19
SMAD6O43541 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.89□□□□□ -0.19
SMAD6O43541 AL359219.1-201ENST00000556311 934 ntBASIC13.89□□□□□ -0.19
SMAD6O43541 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.89□□□□□ -0.19
SMAD6O43541 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SMAD6O43541 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.89□□□□□ -0.19
SMAD6O43541 AC026120.2-201ENST00000617239 309 ntBASIC13.89□□□□□ -0.19
SMAD6O43541 AC127024.7-201ENST00000625101 200 ntBASIC13.89□□□□□ -0.19
SMAD6O43541 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SMAD6O43541 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 AC005562.1-201ENST00000583030 3219 ntBASIC13.89□□□□□ -0.19
SMAD6O43541 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.89□□□□□ -0.19
SMAD6O43541 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMAD6O43541 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms