Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AC004554.1-201ENST00000422830 1468 ntBASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AL627389.1-201ENST00000413508 1182 ntBASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 NDUFS6P1-201ENST00000485187 316 ntBASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AC009560.1-201ENST00000620208 434 ntBASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AC009084.3-201ENST00000623356 437 ntBASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 TBC1D27-202ENST00000424239 1573 ntBASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 AC131212.3-201ENST00000624087 4219 ntBASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CUEDC1Q9NWM3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 PPP1R2P4-201ENST00000424051 595 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 RPL13AP19-201ENST00000434320 584 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AC098934.1-203ENST00000442868 1262 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms