Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 OR10N1P-201ENST00000392758 869 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 LINP1-201ENST00000417112 917 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 RPL35P9-201ENST00000446059 350 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 KRT18P15-201ENST00000458108 1291 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 RN7SL351P-201ENST00000469306 248 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 OR2A1-AS1-210ENST00000496968 531 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 GOLGA2P8-201ENST00000505201 779 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 BATF-202ENST00000555504 361 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 DNM1P51-201ENST00000558149 522 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 USB1-205ENST00000561743 1135 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 SNORD3B-1-201ENST00000577988 758 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC055811.3-201ENST00000584952 686 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC010632.2-201ENST00000588369 1224 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 KF455155.1-201ENST00000604493 303 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AL359091.4-201ENST00000610052 409 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AL589935.2-201ENST00000616471 1231 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AL391597.1-201ENST00000618707 694 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC138466.5-201ENST00000624002 808 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC139713.2-207ENST00000641556 1292 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AC012531.1-201ENST00000562848 2680 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AL645937.6-201ENST00000641122 3727 ntBASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC4.7□□□□□ -1.66
KRTAP4-3Q9BYR4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms