Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 AC092580.1-201ENST00000433998 658 ntBASIC14.38□□□□□ -0.11
CCDC25Q86WR0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 AC100827.2-201ENST00000563214 1194 ntBASIC14.38□□□□□ -0.11
CCDC25Q86WR0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 AC133540.1-201ENST00000620845 1019 ntBASIC14.38□□□□□ -0.11
CCDC25Q86WR0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 AL022323.5-201ENST00000624101 2059 ntBASIC14.38□□□□□ -0.11
CCDC25Q86WR0 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 AC015819.3-201ENST00000624305 2674 ntBASIC14.38□□□□□ -0.11
CCDC25Q86WR0 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC25Q86WR0 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 Z98885.3-201ENST00000624882 1757 ntBASIC14.37□□□□□ -0.11
CCDC25Q86WR0 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 AC098614.1-201ENST00000368528 745 ntBASIC14.37□□□□□ -0.11
CCDC25Q86WR0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 CRB3P1-201ENST00000449338 276 ntBASIC14.37□□□□□ -0.11
CCDC25Q86WR0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 AC006122.1-201ENST00000493323 440 ntBASIC14.37□□□□□ -0.11
CCDC25Q86WR0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 SPCS2P1-201ENST00000561636 679 ntBASIC14.37□□□□□ -0.11
CCDC25Q86WR0 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 MIR4783-201ENST00000580343 82 ntBASIC14.37□□□□□ -0.11
CCDC25Q86WR0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 BTNL10-201ENST00000595971 695 ntBASIC14.37□□□□□ -0.11
CCDC25Q86WR0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CCDC25Q86WR0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms