Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TPT1P6-201ENST00000458298 514 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC011431.1-201ENST00000512971 230 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PCTP-206ENST00000573500 919 ntTSL 3 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 CCND3P2-201ENST00000579393 537 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 SNORA50D-202ENST00000627561 132 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC144831.1-201ENST00000573312 2656 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC024075.2-201ENST00000598112 1473 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC008038.1-201ENST00000634247 1314 ntBASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 SNORA50D-201ENST00000408059 134 ntBASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 CDKN2A-AS1-201ENST00000441769 823 ntBASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 RN7SL672P-201ENST00000474091 317 ntBASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 MTHFD2P7-201ENST00000483867 983 ntBASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 AF186996.6-201ENST00000485294 149 ntBASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LYSMD4Q5XG99 AC026271.1-201ENST00000447794 1348 ntBASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC068418.2-201ENST00000577309 3703 ntBASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms