Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.8□□□□□ -0.04
SMAD3P84022 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
SMAD3P84022 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.8□□□□□ -0.04
SMAD3P84022 AL031590.1-202ENST00000641466 1737 ntBASIC14.8□□□□□ -0.04
SMAD3P84022 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.8□□□□□ -0.04
SMAD3P84022 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMAD3P84022 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SMAD3P84022 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD3P84022 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SMAD3P84022 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 MIR193A-201ENST00000384882 88 ntBASIC14.79□□□□□ -0.04
SMAD3P84022 PPP1R2P10-201ENST00000393023 595 ntBASIC14.79□□□□□ -0.04
SMAD3P84022 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 TUBB8P9-201ENST00000422534 1276 ntBASIC14.79□□□□□ -0.04
SMAD3P84022 IQCF4-203ENST00000428561 420 ntBASIC14.79□□□□□ -0.04
SMAD3P84022 TUBB8P10-201ENST00000430210 1279 ntBASIC14.79□□□□□ -0.04
SMAD3P84022 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC14.79□□□□□ -0.04
SMAD3P84022 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD3P84022 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD3P84022 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.79□□□□□ -0.04
SMAD3P84022 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC14.79□□□□□ -0.04
SMAD3P84022 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.79□□□□□ -0.04
SMAD3P84022 RN7SL202P-201ENST00000584410 262 ntBASIC14.79□□□□□ -0.04
SMAD3P84022 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD3P84022 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.79□□□□□ -0.04
SMAD3P84022 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD3P84022 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.79□□□□□ -0.04
SMAD3P84022 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD3P84022 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD3P84022 AC067750.1-201ENST00000608826 6545 ntBASIC14.79□□□□□ -0.04
SMAD3P84022 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.79□□□□□ -0.04
SMAD3P84022 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD3P84022 AC012617.1-204ENST00000586340 2305 ntBASIC14.78□□□□□ -0.04
SMAD3P84022 AC015909.5-201ENST00000624336 2266 ntBASIC14.78□□□□□ -0.04
SMAD3P84022 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD3P84022 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD3P84022 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 PES1P2-201ENST00000449745 1735 ntBASIC14.78□□□□□ -0.04
SMAD3P84022 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.78□□□□□ -0.04
SMAD3P84022 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD3P84022 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.78□□□□□ -0.04
SMAD3P84022 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMAD3P84022 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.78□□□□□ -0.04
SMAD3P84022 LINC00552-201ENST00000625151 2579 ntBASIC14.78□□□□□ -0.04
SMAD3P84022 FAM86FP-201ENST00000338711 969 ntBASIC14.78□□□□□ -0.04
SMAD3P84022 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD3P84022 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD3P84022 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC14.78□□□□□ -0.04
SMAD3P84022 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC14.78□□□□□ -0.04
SMAD3P84022 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 AC079325.1-201ENST00000430386 857 ntBASIC14.78□□□□□ -0.04
SMAD3P84022 DUX4L31-201ENST00000446466 1136 ntBASIC14.78□□□□□ -0.04
SMAD3P84022 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC14.78□□□□□ -0.04
SMAD3P84022 KRT18P15-201ENST00000458108 1291 ntBASIC14.78□□□□□ -0.04
SMAD3P84022 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.78□□□□□ -0.04
SMAD3P84022 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC14.78□□□□□ -0.04
SMAD3P84022 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD3P84022 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms