Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL356740.1-201ENST00000602192 1297 ntBASIC15.58■□□□□ 0.08
CCNA1P78396 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
CCNA1P78396 AC245369.7-201ENST00000631386 350 ntBASIC15.58■□□□□ 0.08
CCNA1P78396 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNA1P78396 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNA1P78396 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNA1P78396 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCNA1P78396 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.58■□□□□ 0.08
CCNA1P78396 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCNA1P78396 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNA1P78396 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCNA1P78396 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.58■□□□□ 0.08
CCNA1P78396 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCNA1P78396 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.58■□□□□ 0.08
CCNA1P78396 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCNA1P78396 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 CTSL-202ENST00000342020 933 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 ALG1L15P-201ENST00000482834 794 ntBASIC15.57■□□□□ 0.08
CCNA1P78396 AC099328.1-201ENST00000498809 1030 ntBASIC15.57■□□□□ 0.08
CCNA1P78396 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.57■□□□□ 0.08
CCNA1P78396 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC15.57■□□□□ 0.08
CCNA1P78396 DUT-207ENST00000559416 635 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.57■□□□□ 0.08
CCNA1P78396 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC15.57■□□□□ 0.08
CCNA1P78396 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 AC020904.3-201ENST00000624199 442 ntBASIC15.57■□□□□ 0.08
CCNA1P78396 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNA1P78396 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNA1P78396 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNA1P78396 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC15.57■□□□□ 0.08
CCNA1P78396 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 AC007686.3-201ENST00000619017 3487 ntBASIC15.57■□□□□ 0.08
CCNA1P78396 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
CCNA1P78396 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCNA1P78396 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCNA1P78396 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCNA1P78396 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCNA1P78396 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCNA1P78396 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CCNA1P78396 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNA1P78396 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNA1P78396 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 KRT18P44-201ENST00000416086 1285 ntBASIC15.56■□□□□ 0.08
CCNA1P78396 MTHFD2P7-201ENST00000483867 983 ntBASIC15.56■□□□□ 0.08
CCNA1P78396 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CCNA1P78396 AP000920.1-201ENST00000531824 344 ntBASIC15.56■□□□□ 0.08
CCNA1P78396 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC15.56■□□□□ 0.08
CCNA1P78396 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNA1P78396 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.56■□□□□ 0.08
CCNA1P78396 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 AC008038.1-201ENST00000634247 1314 ntBASIC15.56■□□□□ 0.08
CCNA1P78396 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNA1P78396 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNA1P78396 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNA1P78396 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms